RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 ZNF512Q96ME7 567 aaPredicted RBP11.54□□□□□ -0.56
VARS2-210ENST00000490699 SLITRK1Q96PX8 696 aa11.54□□□□□ -0.56
VARS2-210ENST00000490699 TSGA10Q9BZW7 698 aa11.54□□□□□ -0.56
VARS2-210ENST00000490699 IGFLR1Q9H665 355 aa11.54□□□□□ -0.56
VARS2-210ENST00000490699 PIDD1Q9HB75 910 aa11.54□□□□□ -0.56
VARS2-210ENST00000490699 CSNK1G1Q9HCP0 422 aa11.54□□□□□ -0.56
VARS2-210ENST00000490699 MRPL47Q9HD33 250 aaKnown RBP11.54□□□□□ -0.56
VARS2-210ENST00000490699 SPTLC3Q9NUV7 552 aa11.54□□□□□ -0.56
VARS2-210ENST00000490699 ZDHHC7Q9NXF8 308 aa11.54□□□□□ -0.56
VARS2-210ENST00000490699 NAGPAQ9UK23 515 aa11.54□□□□□ -0.56
VARS2-210ENST00000490699 SCINQ9Y6U3 715 aa11.54□□□□□ -0.56
VARS2-210ENST00000490699 DDX3XO00571 662 aaKnown RBP eCLIP11.53□□□□□ -0.56
VARS2-210ENST00000490699 PER2O15055 1255 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 ZSCAN12O43309 604 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 FTLP02792 175 aaPredicted RBP11.53□□□□□ -0.56
VARS2-210ENST00000490699 SPATA31D3P0C874 917 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 UNGP13051 313 aaPredicted RBP11.53□□□□□ -0.56
VARS2-210ENST00000490699 LCP1P13796 627 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 HOXA9P31269 272 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 MAGEA1P43355 309 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 RGS7P49802 495 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 TKTL1P51854 596 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 CDR1P51861 262 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 ADIGQ0VDE8 80 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 TWF1Q12792 350 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 GRIN2CQ14957 1233 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 DDR2Q16832 855 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 CCDC142Q17RM4 750 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 MMS22LQ6ZRQ5 1243 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 SPATA31D4Q6ZUB0 917 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 PAQR9Q6ZVX9 377 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 PHF13Q86YI8 300 aaPredicted RBP11.53□□□□□ -0.56
VARS2-210ENST00000490699 MICALL1Q8N3F8 863 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 PDZD8Q8NEN9 1154 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 SLC30A5Q8TAD4 765 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 SLC35F5Q8WV83 523 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 ZNF653Q96CK0 615 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 FAM161BQ96MY7 647 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 KCNK16Q96T55 309 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 SMOQ99835 787 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 ZSWIM1Q9BR11 485 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 C11orf70Q9BRQ4 267 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 RHOBTB2Q9BYZ6 727 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 SFXN1Q9H9B4 322 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 CNGB3Q9NQW8 809 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 INTUQ9ULD6 942 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 PCDHGC5Q9Y5F6 944 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 HCFC2Q9Y5Z7 792 aa11.53□□□□□ -0.56
VARS2-210ENST00000490699 PTPRDP23468 1912 aa11.52□□□□□ -0.56
VARS2-210ENST00000490699 ZMYND10O75800 440 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 SLC34A2O95436 690 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 ZBED1O96006 694 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 ABCB4P21439 1286 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 MMP8P22894 467 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 YWHAQP27348 245 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 PPP3CCP48454 512 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 PSEN1P49768 467 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 SLC5A3P53794 718 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 GPC5P78333 572 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 CCZ1BP86790 482 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 CCZ1P86791 482 aaPredicted RBP11.52□□□□□ -0.57
VARS2-210ENST00000490699 KIF5AQ12840 1032 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 IFI16Q16666 785 aaKnown RBP11.52□□□□□ -0.57
VARS2-210ENST00000490699 PABPC1LQ4VXU2 614 aaKnown RBP11.52□□□□□ -0.57
VARS2-210ENST00000490699 PKDCCQ504Y2 493 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 HS1BP3Q53T59 392 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 TCEAL5Q5H9L2 206 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 EFHC1Q5JVL4 640 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 HABP4Q5JVS0 413 aaKnown RBP11.52□□□□□ -0.57
VARS2-210ENST00000490699 OR6B2Q6IFH4 312 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 PMF1Q6P1K2 205 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 DNAJC24Q6P3W2 148 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 DCUN1D2Q6PH85 259 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 LILRA6Q6PI73 481 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 EP400NLQ6ZTU2 488 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 ADGRD2Q7Z7M1 963 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 TADA2BQ86TJ2 420 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 EFHBQ8N7U6 833 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 LEMD2Q8NC56 503 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 STKLD1Q8NE28 680 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 GIPC2Q8TF65 315 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 IRGQQ8WZA9 623 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 FBXO32Q969P5 355 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 FAM149B1Q96BN6 582 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 LRCH3Q96II8 777 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 CALR3Q96L12 384 aaKnown RBP11.52□□□□□ -0.57
VARS2-210ENST00000490699 PCDHB18PQ96TA0 734 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 SYT11Q9BT88 431 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 SELENOOQ9BVL4 669 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 SLC4A5Q9BY07 1137 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 KRTAP3-3Q9BYR6 98 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 KRTAP3-2Q9BYR7 98 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 ISCUQ9H1K1 167 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 TTYH1Q9H313 450 aaPredicted RBP11.52□□□□□ -0.57
VARS2-210ENST00000490699 ASAH2Q9NR71 780 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 PARVAQ9NVD7 372 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 LCMT1Q9UIC8 334 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 MAGED2Q9UNF1 606 aaPredicted RBP11.52□□□□□ -0.57
VARS2-210ENST00000490699 PCDHA13Q9Y5I0 950 aa11.52□□□□□ -0.57
VARS2-210ENST00000490699 GOLGA6L9A6NEM1 432 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms