RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 RPL21P46778 160 aaKnown RBP8.9□□□□□ -0.98
VTI1A-207ENST00000489357 GYS2P54840 703 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 MRPS25P82663 173 aaKnown RBP8.9□□□□□ -0.98
VTI1A-207ENST00000489357 IFFO1Q0D2I5 559 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 MYO1EQ12965 1108 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 TMEM132DQ14C87 1099 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 TRADDQ15628 312 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 GRIK4Q16099 956 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 CNGA2Q16280 664 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 PTPROQ16827 1216 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 HADHQ16836 314 aaKnown RBP8.9□□□□□ -0.98
VTI1A-207ENST00000489357 TRIM71Q2Q1W2 868 aaKnown RBP8.9□□□□□ -0.98
VTI1A-207ENST00000489357 C6orf118Q5T5N4 469 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 EEF1DP3Q658K8 133 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 MFSD5Q6N075 450 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 TTC27Q6P3X3 843 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 DCUN1D2Q6PH85 259 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 DDX42Q86XP3 938 aaKnown RBP eCLIP8.9□□□□□ -0.98
VTI1A-207ENST00000489357 LRRC52Q8N7C0 313 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 C1orf127Q8N9H9 656 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 CXorf38Q8TB03 319 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 FBXO25Q8TCJ0 367 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 ARL8AQ96BM9 186 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 CENPTQ96BT3 561 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 TMEM176AQ96HP8 235 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 ACAP3Q96P50 834 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 GDF15Q99988 308 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 DCLK3Q9C098 648 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 TRPV6Q9H1D0 765 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 NEUROG2Q9H2A3 272 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 DPH5Q9H2P9 285 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.9□□□□□ -0.98
VTI1A-207ENST00000489357 AKT3Q9Y243 479 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 ATP11BQ9Y2G3 1177 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 A0A087WZ62 844 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 A0A1W2PPC1 479 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 LACTBL1A8MY62 500 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 DCDC2CA8MYV0 355 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 NRG2O14511 850 aaPredicted RBP8.89□□□□□ -0.99
VTI1A-207ENST00000489357 B4GALT5O43286 388 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 AGTP01019 485 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 ITGAVP06756 1048 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 CXCL8P10145 99 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 ATF2P15336 505 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 ATF7P17544 494 aaPredicted RBP8.89□□□□□ -0.99
VTI1A-207ENST00000489357 ARF4P18085 180 aaPredicted RBP8.89□□□□□ -0.99
VTI1A-207ENST00000489357 BMP8BP34820 402 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 PCK1P35558 622 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 SCNN1AP37088 669 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 MDH1P40925 334 aaKnown RBP8.89□□□□□ -0.99
VTI1A-207ENST00000489357 MAGEA10P43363 369 aaPredicted RBP8.89□□□□□ -0.99
VTI1A-207ENST00000489357 RAD23BP54727 409 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 PLTPP55058 493 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 KRT17Q04695 432 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 NFX1Q12986 1120 aaKnown RBP8.89□□□□□ -0.99
VTI1A-207ENST00000489357 GPNMBQ14956 572 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 TAZQ16635 292 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 WDR72Q3MJ13 1102 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 ODF2Q5BJF6 829 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 TFDP3Q5H9I0 405 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 MARCH8Q5T0T0 291 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 GDF6Q6KF10 455 aaPredicted RBP8.89□□□□□ -0.99
VTI1A-207ENST00000489357 NOTUMQ6P988 496 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 SLC27A1Q6PCB7 646 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 RHBDF2Q6PJF5 856 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 TRAF7Q6Q0C0 670 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 ZNF365Q70YC5 407 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 B4GALNT4Q76KP1 1039 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 ARCQ7LC44 396 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 RPAINQ86UA6 219 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 UNC93AQ86WB7 457 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 ZDHHC17Q8IUH5 632 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 CCDC50Q8IVM0 306 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 ZDHHC14Q8IZN3 488 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 CNPY4Q8N129 248 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 ADAMTS19Q8TE59 1207 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 STK32AQ8WU08 396 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 TRAPPC12Q8WVT3 735 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 GLMNQ92990 594 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 NKD2Q969F2 451 aaPredicted RBP8.89□□□□□ -0.99
VTI1A-207ENST00000489357 TLCD1Q96CP7 247 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 BTBD6Q96KE9 485 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 SCLT1Q96NL6 688 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 HINFPQ9BQA5 517 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 FDXACB1Q9BRP7 624 aaPredicted RBP8.89□□□□□ -0.99
VTI1A-207ENST00000489357 GCOM2Q9BZD3 368 aaPredicted RBP8.89□□□□□ -0.99
VTI1A-207ENST00000489357 MINDY3Q9H8M7 445 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 CYLDQ9NQC7 956 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 TRMT13Q9NUP7 481 aaKnown RBP8.89□□□□□ -0.99
VTI1A-207ENST00000489357 SIX4Q9UIU6 781 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 BARX2Q9UMQ3 279 aaPredicted RBP8.89□□□□□ -0.99
VTI1A-207ENST00000489357 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.89□□□□□ -0.99
VTI1A-207ENST00000489357 ATP8A1Q9Y2Q0 1164 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 SNX24Q9Y343 169 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 NEU2Q9Y3R4 380 aa8.89□□□□□ -0.99
VTI1A-207ENST00000489357 TANC1Q9C0D5 1861 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 ERICH4A6NGS2 130 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 ZNF487B1APH4 448 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 PQBP1O60828 265 aaKnown RBP8.88□□□□□ -0.99
VTI1A-207ENST00000489357 TIMP1P01033 207 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms