RNA–Protein interactions for RNA: ENST00000489198.1

MSRB1-204, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3

Gene MSRB1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-204ENST00000489198 RIN3Q8TB24 985 aa12.86□□□□□ -0.35
MSRB1-204ENST00000489198 SEMA4DQ92854 862 aa12.86□□□□□ -0.35
MSRB1-204ENST00000489198 SLC35C1Q96A29 364 aa12.86□□□□□ -0.35
MSRB1-204ENST00000489198 HNRNPABQ99729 332 aaKnown RBP12.86□□□□□ -0.35
MSRB1-204ENST00000489198 DNAI2Q9GZS0 605 aa12.86□□□□□ -0.35
MSRB1-204ENST00000489198 SEMA4AQ9H3S1 761 aa12.86□□□□□ -0.35
MSRB1-204ENST00000489198 METTL14Q9HCE5 456 aaKnown RBP12.86□□□□□ -0.35
MSRB1-204ENST00000489198 TRPC7Q9HCX4 862 aa12.86□□□□□ -0.35
MSRB1-204ENST00000489198 PNPLA8Q9NP80 782 aa12.86□□□□□ -0.35
MSRB1-204ENST00000489198 PRMT8Q9NR22 394 aaPredicted RBP12.86□□□□□ -0.35
MSRB1-204ENST00000489198 GKN1Q9NS71 199 aa12.86□□□□□ -0.35
MSRB1-204ENST00000489198 KRT82Q9NSB4 513 aa12.86□□□□□ -0.35
MSRB1-204ENST00000489198 GTSE1Q9NYZ3 720 aa12.86□□□□□ -0.35
MSRB1-204ENST00000489198 FAM186AA6NE01 2351 aa12.86□□□□□ -0.35
MSRB1-204ENST00000489198 MIA3Q5JRA6 1907 aa12.86□□□□□ -0.35
MSRB1-204ENST00000489198 TICRRQ7Z2Z1 1910 aa12.86□□□□□ -0.35
MSRB1-204ENST00000489198 BICDL2A1A5D9 508 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 TRIM49BA6NDI0 452 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 LAMTOR5O43504 91 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 AP1G2O75843 785 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 OAS1P00973 400 aaKnown RBP12.85□□□□□ -0.35
MSRB1-204ENST00000489198 ZDHHC11BP0C7U3 371 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 SP9P0CG40 484 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 CHRNB1P11230 501 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 HDCP19113 662 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 YWHAQP27348 245 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 TUBP50607 506 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 SLC5A3P53794 718 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 TNK2Q07912 1038 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 RUNX3Q13761 415 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 LRRC32Q14392 662 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 CBWD6Q4V339 395 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 CBWD3Q5JTY5 395 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 DGKKQ5KSL6 1271 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 CBWD5Q5RIA9 395 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 CC2D1AQ6P1N0 951 aaPredicted RBP12.85□□□□□ -0.35
MSRB1-204ENST00000489198 TXNDC11Q6PKC3 985 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 FRMD5Q7Z6J6 570 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 SYNPOQ8N3V7 929 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 ARL14EPQ8N8R7 260 aaPredicted RBP12.85□□□□□ -0.35
MSRB1-204ENST00000489198 C12orf29Q8N999 325 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 TRIML1Q8N9V2 468 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 ZMIZ2Q8NF64 920 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 SLC2A14Q8TDB8 520 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 WHAMMQ8TF30 809 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 OSCP1Q8WVF1 389 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 NELL1Q92832 810 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 TWNKQ96RR1 684 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 CYP2S1Q96SQ9 504 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 KCNK16Q96T55 309 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 SMOQ99835 787 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
MSRB1-204ENST00000489198 MED10Q9BTT4 135 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 HPS4Q9NQG7 708 aa12.85□□□□□ -0.35
MSRB1-204ENST00000489198 SPATA6Q9NWH7 488 aaPredicted RBP12.85□□□□□ -0.35
MSRB1-204ENST00000489198 NDRG2Q9UN36 371 aaKnown RBP12.85□□□□□ -0.35
MSRB1-204ENST00000489198 EP300Q09472 2414 aaPredicted RBP12.84□□□□□ -0.35
MSRB1-204ENST00000489198 PTPRZ1P23471 2315 aaPredicted RBP12.84□□□□□ -0.35
MSRB1-204ENST00000489198 PRR23AA6NEV1 266 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 PAPSS2O95340 614 aaPredicted RBP12.84□□□□□ -0.35
MSRB1-204ENST00000489198 FAM200BP0CF97 657 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 CCDC130P13994 396 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 SOX9P48436 509 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 AMPD2Q01433 879 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 MTAPQ13126 283 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 CCINQ13939 588 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 WDR44Q5JSH3 913 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 ZC3H14Q6PJT7 736 aaKnown RBP12.84□□□□□ -0.35
MSRB1-204ENST00000489198 CLEC17AQ6ZS10 378 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 SH3RF2Q8TEC5 729 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 ATP2A3Q93084 1043 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 FBXO32Q969P5 355 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 FAM126AQ9BYI3 521 aaPredicted RBP12.84□□□□□ -0.35
MSRB1-204ENST00000489198 FBXO44Q9H4M3 255 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 MMRN2Q9H8L6 949 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 LMAN1LQ9HAT1 526 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 GPR179Q6PRD1 2367 aa12.84□□□□□ -0.35
MSRB1-204ENST00000489198 OTOL1A6NHN0 477 aaPredicted RBP12.83□□□□□ -0.36
MSRB1-204ENST00000489198 HHLA1C9JL84 531 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 TRDMT1O14717 391 aaKnown RBP12.83□□□□□ -0.36
MSRB1-204ENST00000489198 GFRA3O60609 400 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 TDGF1P13385 188 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 ANP32AP39687 249 aaKnown RBP12.83□□□□□ -0.36
MSRB1-204ENST00000489198 MARSP56192 900 aaKnown RBP12.83□□□□□ -0.36
MSRB1-204ENST00000489198 ZXDBP98169 803 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 ORC1Q13415 861 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 EML3Q32P44 896 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 DCAF17Q5H9S7 520 aaPredicted RBP12.83□□□□□ -0.36
MSRB1-204ENST00000489198 TCERG1LQ5VWI1 586 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 CLEC20AQ6ZU45 233 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 DDX42Q86XP3 938 aaKnown RBP eCLIP12.83□□□□□ -0.36
MSRB1-204ENST00000489198 SPEM1Q8N4L4 309 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 CPA6Q8N4T0 437 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 SCAMP5Q8TAC9 235 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 NELFBQ8WX92 580 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 NKD2Q969F2 451 aaPredicted RBP12.83□□□□□ -0.36
MSRB1-204ENST00000489198 CHFRQ96EP1 664 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 CYFIP2Q96F07 1278 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 RNF38Q9H0F5 515 aa12.83□□□□□ -0.36
MSRB1-204ENST00000489198 EBF3Q9H4W6 596 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms