RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 FAM171BQ6P995 826 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 SLC36A4Q6YBV0 504 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 CCNI2Q6ZMN8 369 aaPredicted RBP17.32■□□□□ 0.36
USP48-210ENST00000489108 NT5DC4Q86YG4 428 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 C1orf127Q8N9H9 656 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 ADAMTS14Q8WXS8 1223 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 FUBP3Q96I24 572 aaKnown RBP eCLIP17.32■□□□□ 0.36
USP48-210ENST00000489108 FAM84AQ96KN4 292 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 DNAAF2Q9NVR5 837 aaKnown RBP17.32■□□□□ 0.36
USP48-210ENST00000489108 SMPD4Q9NXE4 827 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 PCDHB9Q9Y5E1 797 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 SNX9Q9Y5X1 595 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 SLC9A3R1O14745 358 aaPredicted RBP17.31■□□□□ 0.36
USP48-210ENST00000489108 GABRDO14764 452 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 KRT18P05783 430 aaKnown RBP17.31■□□□□ 0.36
USP48-210ENST00000489108 SYPP08247 313 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 FTH1P19P0C7X4 201 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 PFKLP17858 780 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 GABRG2P18507 467 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 PLCG1P19174 1290 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 ADSSP30520 456 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 LHX1P48742 406 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 MCM6Q14566 821 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 RABEPKQ7Z6M1 372 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 SLC41A1Q8IVJ1 513 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 CSGALNACT2Q8N6G5 542 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 ZSWIM2Q8NEG5 633 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 MDM1Q8TC05 714 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 POMGNT1Q8WZA1 660 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 SPATA17Q96L03 361 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 BLOC1S4Q9NUP1 217 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 GDAP2Q9NXN4 497 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 MAGEC2Q9UBF1 373 aaPredicted RBP17.31■□□□□ 0.36
USP48-210ENST00000489108 CPQQ9Y646 472 aa17.31■□□□□ 0.36
USP48-210ENST00000489108 SMG1Q96Q15 3661 aaKnown RBP17.31■□□□□ 0.36
USP48-210ENST00000489108 ZNF840PA6NDX5 716 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 BDNFP23560 247 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 PCSK1P29120 753 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 ABCD1P33897 745 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 GRIK1P39086 918 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 DENND5BQ6ZUT9 1274 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 ADGRF2Q8IZF7 708 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 PHTF2Q8N3S3 785 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 KIAA1958Q8N8K9 716 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 CXorf38Q8TB03 319 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 CALCOCO1Q9P1Z2 691 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 CFAP97Q9P2B7 532 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 RAXQ9Y2V3 346 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 CELSR3Q9NYQ7 3312 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 ACACAQ13085 2346 aa17.3■□□□□ 0.36
USP48-210ENST00000489108 IGHV1OR15-9A0A0B4J2B8 117 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 TBC1D3BA6NDS4 549 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 GJB3O75712 270 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 ADH1CP00326 375 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 ABL1P00519 1130 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 KRT19P08727 400 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 ADH5P11766 374 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 LMO2P25791 158 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 WASP42768 502 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 PSMC1P62191 440 aaKnown RBP17.29■□□□□ 0.36
USP48-210ENST00000489108 SLC14A1Q13336 389 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 POSTNQ15063 836 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 SOWAHAQ2M3V2 549 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 LY6G5CQ5SRR4 150 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 C4orf50Q6ZRC1 276 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 TOP6BLQ8N6T0 577 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 LRRC52Q8N7C0 313 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 NAT16Q8N8M0 369 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 TRIML1Q8N9V2 468 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 CACTINQ8WUQ7 758 aaKnown RBP17.29■□□□□ 0.36
USP48-210ENST00000489108 MYLPFQ96A32 169 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 LRIG1Q96JA1 1093 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 FAM213AQ9BRX8 229 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 PTPRBP23467 1997 aa17.29■□□□□ 0.36
USP48-210ENST00000489108 A0A1W2PQD8 194 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.28■□□□□ 0.36
USP48-210ENST00000489108 TBCAO75347 108 aaKnown RBP17.28■□□□□ 0.36
USP48-210ENST00000489108 OLFM2O95897 454 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 PLEKHG6Q3KR16 790 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 VSTM1Q6UX27 236 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 SLCO6A1Q86UG4 719 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 ZNF513Q8N8E2 541 aaPredicted RBP17.28■□□□□ 0.36
USP48-210ENST00000489108 ERLEC1Q96DZ1 483 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 CALML4Q96GE6 196 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 HSPA12BQ96MM6 686 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 SYT15Q9BQS2 421 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 TTLL2Q9BWV7 592 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 ST6GALNAC4Q9H4F1 302 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 CRTAC1Q9NQ79 661 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 HCN2Q9UL51 889 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 ASXL3Q9C0F0 2248 aa17.28■□□□□ 0.36
USP48-210ENST00000489108 APC2O95996 2303 aa17.27■□□□□ 0.36
USP48-210ENST00000489108 URB1O60287 2271 aaKnown RBP17.27■□□□□ 0.36
USP48-210ENST00000489108 BPTFQ12830 3046 aa17.27■□□□□ 0.36
USP48-210ENST00000489108 ANXA13P27216 316 aa17.27■□□□□ 0.36
USP48-210ENST00000489108 UBA7P41226 1012 aa17.27■□□□□ 0.36
USP48-210ENST00000489108 RBP5P82980 135 aa17.27■□□□□ 0.36
USP48-210ENST00000489108 CYP27A1Q02318 531 aa17.27■□□□□ 0.36
USP48-210ENST00000489108 RILPL1Q5EBL4 403 aa17.27■□□□□ 0.36
USP48-210ENST00000489108 ARL6IP4Q66PJ3 421 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms