RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 IKQ13123 557 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-229ENST00000488765 FNBP1LQ5T0N5 605 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 ANKRD22Q5VYY1 191 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 THOC7Q6I9Y2 204 aaKnown RBP16.86■□□□□ 0.29
MCF2L-229ENST00000488765 KRT27Q7Z3Y8 459 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 CCDC28BQ9BUN5 200 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 TRPC5Q9UL62 973 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-229ENST00000488765 DUOX1Q9NRD9 1551 aa16.86■□□□□ 0.29
MCF2L-229ENST00000488765 FKBP6O75344 327 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 BMPR2Q13873 1038 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 Q6ZNX1 250 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 ATP2A3Q93084 1043 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 SOX13Q9UN79 622 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 POMPQ9Y244 141 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 SH3PXD2BA1X283 911 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 ETFBP38117 255 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 TAS2R40P59535 323 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 CARTPTQ16568 116 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 C16orf87Q6PH81 154 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 BANPQ8N9N5 519 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 CYP2W1Q8TAV3 490 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 WRNIP1Q96S55 665 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 OLFML3Q9NRN5 406 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 RSL24D1Q9UHA3 163 aaKnown RBP16.85■□□□□ 0.29
MCF2L-229ENST00000488765 KANSL1LA0AUZ9 987 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 I3L4J1 428 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 NOP56O00567 594 aaKnown RBP16.85■□□□□ 0.29
MCF2L-229ENST00000488765 DGKIO75912 1065 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 ZBTB11O95625 1053 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-229ENST00000488765 MMP10P09238 476 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 AKR1B1P15121 316 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 GLRA2P23416 452 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 PPP3CAQ08209 521 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 EML3Q32P44 896 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 KCTD1Q719H9 257 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 CLVS1Q8IUQ0 354 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-229ENST00000488765 TMCO5AQ8N6Q1 288 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 MAN1C1Q9NR34 630 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 HERC5Q9UII4 1024 aaKnown RBP16.85■□□□□ 0.29
MCF2L-229ENST00000488765 RABGEF1Q9UJ41 708 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 IKBKGQ9Y6K9 419 aa16.85■□□□□ 0.29
MCF2L-229ENST00000488765 DENND3A2RUS2 1198 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 FAM13AO94988 1023 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 NR4A1P22736 598 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 EN1Q05925 392 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-229ENST00000488765 MAP3K21Q5TCX8 1036 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 METTL21CQ5VZV1 264 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 TPH2Q8IWU9 490 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 C12orf50Q8NA57 414 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-229ENST00000488765 FBXO36Q8NEA4 188 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 EPS8L1Q8TE68 723 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 ACSS2Q9NR19 701 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 CLUHO75153 1309 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 TOM1L1O75674 476 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 SEC24DO94855 1032 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-229ENST00000488765 PRAMEP78395 509 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 GSTO1P78417 241 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 OTUD4Q01804 1114 aaKnown RBP16.84■□□□□ 0.29
MCF2L-229ENST00000488765 SNAPC2Q13487 334 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 PACS1Q6VY07 963 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 TTC13Q8NBP0 860 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 DRC3Q9H069 523 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 VPS11Q9H270 941 aa16.84■□□□□ 0.29
MCF2L-229ENST00000488765 TCRBV7S3A2A0A539 114 aa16.83■□□□□ 0.29
MCF2L-229ENST00000488765 ITM2AO43736 263 aa16.83■□□□□ 0.29
MCF2L-229ENST00000488765 PSMC1P62191 440 aaKnown RBP16.83■□□□□ 0.29
MCF2L-229ENST00000488765 CYP2A13Q16696 494 aa16.83■□□□□ 0.29
MCF2L-229ENST00000488765 DNAL1Q4LDG9 190 aa16.83■□□□□ 0.29
MCF2L-229ENST00000488765 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.83■□□□□ 0.29
MCF2L-229ENST00000488765 ZSCAN18Q8TBC5 510 aaPredicted RBP16.83■□□□□ 0.29
MCF2L-229ENST00000488765 ZNF398Q8TD17 642 aa16.83■□□□□ 0.29
MCF2L-229ENST00000488765 HELQQ8TDG4 1101 aa16.83■□□□□ 0.29
MCF2L-229ENST00000488765 GPATCH1Q9BRR8 931 aaKnown RBP16.83■□□□□ 0.29
MCF2L-229ENST00000488765 AVILO75366 819 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 CSPG5O95196 566 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 CPOXP36551 454 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 CAV1Q03135 178 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 NFIAQ12857 509 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 PTK7Q13308 1070 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 PPP1R14CQ8TAE6 165 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 ACTRT2Q8TDY3 377 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 USP13Q92995 863 aaPredicted RBP16.83■□□□□ 0.28
MCF2L-229ENST00000488765 LRGUKQ96M69 825 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 RTFDC1Q9BY42 306 aaPredicted RBP16.83■□□□□ 0.28
MCF2L-229ENST00000488765 CDH22Q9UJ99 828 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 CROCCQ5TZA2 2017 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 ANXA13P27216 316 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 STIP1P31948 543 aaKnown RBP16.83■□□□□ 0.28
MCF2L-229ENST00000488765 FMO1Q01740 532 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 CDC14AQ9UNH5 594 aa16.83■□□□□ 0.28
MCF2L-229ENST00000488765 PPEF1O14829 653 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-229ENST00000488765 FAM58BPP0C7Q3 252 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 CHRNA5P30532 468 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 PKNOX1P55347 436 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 PFKPQ01813 784 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 CENPUQ71F23 418 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 SNX29P2Q8IUI4 249 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 FAM156AQ8NDB6 213 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 COX4I2Q96KJ9 171 aa16.82■□□□□ 0.28
MCF2L-229ENST00000488765 PI4K2AQ9BTU6 479 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms