RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 WNT6Q9Y6F9 365 aa13.9□□□□□ -0.18
ATPAF2-207ENST00000488753 DENND4CQ5VZ89 1909 aa13.9□□□□□ -0.18
ATPAF2-207ENST00000488753 LEFTY2O00292 366 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 CALUO43852 315 aaPredicted RBP13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 FOXD2O60548 495 aaPredicted RBP13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 RTN3O95197 1032 aaPredicted RBP13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 VNN1O95497 513 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 EGFP01133 1207 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 NDUFA8P51970 172 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 CACNA2D1P54289 1103 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 TAF10Q12962 218 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 PRR23BQ6ZRT6 265 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 SV2AQ7L0J3 742 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 DDX42Q86XP3 938 aaKnown RBP eCLIP13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 NUP93Q8N1F7 819 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 CAMKK1Q8N5S9 505 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 CD101Q93033 1021 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 SMARCD1Q96GM5 515 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 SMYD3Q9H7B4 428 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 FBRSL1Q9HCM7 1045 aaKnown RBP13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 TMEM30AQ9NV96 361 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 COMMD8Q9NX08 183 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 SLC8A2Q9UPR5 921 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 OBSL1O75147 1896 aa13.89□□□□□ -0.19
ATPAF2-207ENST00000488753 CLDN5O00501 218 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 SLC9A3R1O14745 358 aaPredicted RBP13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 RNF40O75150 1001 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 AKAP3O75969 853 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 YWHAQP27348 245 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 TUBP50607 506 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 CDH8P55286 799 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 DLG4P78352 724 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 ZXDBP98169 803 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 DPYDQ12882 1025 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 RSPO4Q2I0M5 234 aaPredicted RBP13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 SNX30Q5VWJ9 437 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 CEP135Q66GS9 1140 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 HEATR6Q6AI08 1181 aaKnown RBP13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 PKN3Q6P5Z2 889 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 SYT13Q7L8C5 426 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 FAM35AQ86V20 835 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 UNC93AQ86WB7 457 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 TTC16Q8NEE8 873 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 ACDQ96AP0 544 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 CCDC34Q96HJ3 373 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 RNF38Q9H0F5 515 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 DMAP1Q9NPF5 467 aaPredicted RBP13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 IL37Q9NZH6 218 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 USP18Q9UMW8 372 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 CPQQ9Y646 472 aa13.88□□□□□ -0.19
ATPAF2-207ENST00000488753 FAM92AA1XBS5 289 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 TNFRSF10BO14763 440 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 CLSTN1O94985 981 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 ASS1P00966 412 aaKnown RBP13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 TRIM21P19474 475 aaKnown RBP13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 RPL13P26373 211 aaKnown RBP13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 VAMP7P51809 220 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 SRSF5Q13243 272 aaKnown RBP13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 LPAL2Q16609 132 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 KRBA2Q6ZNG9 492 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 PAQR9Q6ZVX9 377 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 INTS8Q75QN2 995 aaKnown RBP13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 CEP68Q76N32 757 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 FUKQ8N0W3 1084 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 CRYBG2Q8N1P7 616 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 GUF1Q8N442 669 aaKnown RBP13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 GAB3Q8WWW8 586 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 LOXL4Q96JB6 756 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 KCNK16Q96T55 309 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 DUSP9Q99956 384 aaKnown RBP13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 SDCBP2Q9H190 292 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 LINC00597Q9H2U6 94 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 PARD6AQ9NPB6 346 aa13.87□□□□□ -0.19
ATPAF2-207ENST00000488753 E2F8A0AVK6 867 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 RPP40O75818 363 aaKnown RBP13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 ABL1P00519 1130 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 PRR29P0C7W0 189 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 NR2F2P24468 414 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 EIF2DP41214 584 aaKnown RBP13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 PIK3CAP42336 1068 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 ASPAP45381 313 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 RAP1GAPP47736 663 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 SLC5A3P53794 718 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 SPEM2Q0P670 501 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 CSRP2Q16527 193 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 C1orf220Q5T0J3 134 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 NAIF1Q69YI7 327 aaPredicted RBP13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 SCARA5Q6ZMJ2 495 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 CACNA2D4Q7Z3S7 1137 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 ADGRG2Q8IZP9 1017 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 FAM160A2Q8N612 972 aaPredicted RBP13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 RPLP0P6Q8NHW5 317 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 EZH1Q92800 747 aaPredicted RBP13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 FBXO32Q969P5 355 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 MED10Q9BTT4 135 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 IMPG2Q9BZV3 1241 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 CSNK1G1Q9HCP0 422 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 TBC1D14Q9P2M4 693 aa13.86□□□□□ -0.19
ATPAF2-207ENST00000488753 EBF1Q9UH73 591 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms