RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 KRI1Q8N9T8 703 aaKnown RBP13.14□□□□□ -0.31
ATPAF1-205ENST00000487193 SPPL2BQ8TCT7 592 aa13.14□□□□□ -0.31
ATPAF1-205ENST00000487193 SNX19Q92543 992 aa13.14□□□□□ -0.31
ATPAF1-205ENST00000487193 HIC2Q96JB3 615 aa13.14□□□□□ -0.31
ATPAF1-205ENST00000487193 SENP8Q96LD8 212 aa13.14□□□□□ -0.31
ATPAF1-205ENST00000487193 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
ATPAF1-205ENST00000487193 ZNF578Q96N58 590 aaPredicted RBP13.14□□□□□ -0.31
ATPAF1-205ENST00000487193 ACO2Q99798 780 aaKnown RBP13.14□□□□□ -0.31
ATPAF1-205ENST00000487193 HSD17B14Q9BPX1 270 aa13.14□□□□□ -0.31
ATPAF1-205ENST00000487193 UXTQ9UBK9 157 aaPredicted RBP13.14□□□□□ -0.31
ATPAF1-205ENST00000487193 SLCO1B1Q9Y6L6 691 aa13.14□□□□□ -0.31
ATPAF1-205ENST00000487193 BOD1L1Q8NFC6 3051 aa13.14□□□□□ -0.31
ATPAF1-205ENST00000487193 ANAPC1Q9H1A4 1944 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 K7ENP7 123 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 PRPF40AO75400 957 aaKnown RBP13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 ADH5P11766 374 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 AFF3P51826 1226 aaKnown RBP13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 EFNA5P52803 228 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 EXOSC10Q01780 885 aaKnown RBP13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 DDR2Q16832 855 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 SLC10A6Q3KNW5 377 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 EGFLAMQ63HQ2 1017 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 CREB3L3Q68CJ9 461 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 INO80CQ6PI98 192 aaPredicted RBP13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 LAYNQ6UX15 382 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 PHTF2Q8N3S3 785 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 CADM4Q8NFZ8 388 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 C1orf216Q8TAB5 229 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 KCNV2Q8TDN2 545 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 DPH1Q9BZG8 443 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 LRRC4CQ9HCJ2 640 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 CD248Q9HCU0 757 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 PTPRHQ9HD43 1115 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 STARD5Q9NSY2 213 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 ARHGAP26Q9UNA1 814 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 CLCA2Q9UQC9 943 aa13.13□□□□□ -0.31
ATPAF1-205ENST00000487193 FBN2P35556 2912 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 KCNJ18B7U540 433 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 PPEF2O14830 753 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 BAG4O95429 457 aaKnown RBP13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 ADH1CP00326 375 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 MPOP05164 745 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 NFICP08651 508 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 TCF3P15923 654 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 ACADVLP49748 655 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 TEAD4Q15561 434 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 PRAMEF14Q5SWL7 426 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 C2orf15Q8WU43 125 aaKnown RBP13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 IGSF8Q969P0 613 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 MTMR9Q96QG7 549 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 SH3GLB2Q9NR46 395 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 PCDHB5Q9Y5E4 795 aa13.12□□□□□ -0.31
ATPAF1-205ENST00000487193 KNL1Q8NG31 2342 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 M0R2N6 131 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 TRIM24O15164 1050 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 MCF2P10911 925 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 GSPT1P15170 499 aaKnown RBP13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 LRPAP1P30533 357 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 NUCB1Q02818 461 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 PPP2R5AQ15172 486 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 LINC00303Q3SY05 128 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 KCNT1Q5JUK3 1230 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 THEM5Q8N1Q8 247 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 EID2Q8N6I1 236 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 FSIP1Q8NA03 581 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 ZBTB45Q96K62 511 aaPredicted RBP13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 IFT74Q96LB3 600 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 ARHGAP9Q9BRR9 750 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 TARS2Q9BW92 718 aaKnown RBP13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 RPF1Q9H9Y2 349 aaKnown RBP13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 TMLHEQ9NVH6 421 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 DEC1Q9P2X7 70 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 DAXXQ9UER7 740 aaPredicted RBP13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 PCDHB1Q9Y5F3 818 aa13.11□□□□□ -0.31
ATPAF1-205ENST00000487193 WASH3PC4AMC7 463 aa13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 SLC9A3R1O14745 358 aaPredicted RBP13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 XRCC6P12956 609 aaKnown RBP eCLIP13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 LILRA4P59901 499 aa13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 SAFBQ15424 915 aaKnown RBP eCLIP13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 LY6G5CQ5SRR4 150 aa13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 BTBD8Q5XKL5 378 aa13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 CCDC81Q6ZN84 652 aa13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 NUDT18Q6ZVK8 323 aa13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 METTL23Q86XA0 190 aa13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 SLFN12Q8IYM2 578 aa13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 PHF12Q96QT6 1004 aa13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 ITM2CQ9NQX7 267 aa13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 SMPD4Q9NXE4 827 aa13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 BSNQ9UPA5 3926 aa13.1□□□□□ -0.31
ATPAF1-205ENST00000487193 TULP3O75386 442 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 NOL4O94818 638 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 ITGAVP06756 1048 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 CXCL8P10145 99 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 ITGB6P18564 788 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 FOSBP53539 338 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 INSM1Q01101 510 aaPredicted RBP13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 CACNA1DQ01668 2161 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 GAD2Q05329 585 aa13.09□□□□□ -0.31
ATPAF1-205ENST00000487193 SMARCB1Q12824 385 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms