RNA–Protein interactions for RNA: ENST00000486420.1

C9orf16-202, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-202ENST00000486420 TSPAN16Q9UKR8 245 aa13.09□□□□□ -0.31
C9orf16-202ENST00000486420 MAGED2Q9UNF1 606 aaPredicted RBP13.09□□□□□ -0.31
C9orf16-202ENST00000486420 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.09□□□□□ -0.31
C9orf16-202ENST00000486420 SORCS3Q9UPU3 1222 aa13.09□□□□□ -0.31
C9orf16-202ENST00000486420 TRAV19A0A0A6YYK7 116 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 A0A1W2PRU2 124 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 ANHXE9PGG2 379 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 THAP12O43422 761 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 LSM8O95777 96 aaKnown RBP13.08□□□□□ -0.32
C9orf16-202ENST00000486420 F11P03951 625 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 TPM1P09493 284 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 USP17L7P0C7H9 530 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 SLC5A3P53794 718 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 MAP3K7CLP57077 242 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 FANCCQ00597 558 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 PLCB2Q00722 1185 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 KCNMA1Q12791 1236 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 TRIM14Q14142 442 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 DRAP1Q14919 205 aaPredicted RBP13.08□□□□□ -0.32
C9orf16-202ENST00000486420 GOLGA7BQ2TAP0 167 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 TRIM72Q6ZMU5 477 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 PAQR9Q6ZVX9 377 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 CCDC186Q7Z3E2 898 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 LUZP1Q86V48 1076 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 SIX6OS1Q8N1H7 587 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 TTC9BQ8N6N2 239 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 IRGQQ8WZA9 623 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 FBXO32Q969P5 355 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 EXOC4Q96A65 974 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 LPIN3Q9BQK8 851 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 NAA15Q9BXJ9 866 aaKnown RBP13.08□□□□□ -0.32
C9orf16-202ENST00000486420 LHX5Q9H2C1 402 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 HSD3B7Q9H2F3 369 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 PDCL3Q9H2J4 239 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 SIX2Q9NPC8 291 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 CNGB3Q9NQW8 809 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 FAM207AQ9NSI2 230 aaPredicted RBP13.08□□□□□ -0.32
C9orf16-202ENST00000486420 HCFC1R1Q9NWW0 138 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 PCDHGC3Q9UN70 934 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 SCML2Q9UQR0 700 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 SIK3Q9Y2K2 1263 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 NME7Q9Y5B8 376 aa13.08□□□□□ -0.32
C9orf16-202ENST00000486420 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.08□□□□□ -0.32
C9orf16-202ENST00000486420 C2orf16Q68DN1 1984 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 C2CD4DB7Z1M9 353 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 F8VZ95 297 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 CLDN5O00501 218 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 TNFRSF10BO14763 440 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 HCRTO43612 131 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 LRRN2O75325 713 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 RALAP11233 206 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 ATP1A3P13637 1013 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 FERP16591 822 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 TDGQ13569 410 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 PTPN21Q16825 1174 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 GPR158Q5T848 1215 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 KLHDC10Q6PID8 442 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 APTXQ7Z2E3 356 aaKnown RBP13.07□□□□□ -0.32
C9orf16-202ENST00000486420 CELF5Q8N6W0 485 aaKnown RBP13.07□□□□□ -0.32
C9orf16-202ENST00000486420 SHKBP1Q8TBC3 707 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 ZNF606Q8WXB4 792 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 MSANTD3Q96H12 275 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 SMOQ99835 787 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 OLA1Q9NTK5 396 aaKnown RBP13.07□□□□□ -0.32
C9orf16-202ENST00000486420 CLIC5Q9NZA1 410 aa13.07□□□□□ -0.32
C9orf16-202ENST00000486420 BZW2Q9Y6E2 419 aaKnown RBP13.07□□□□□ -0.32
C9orf16-202ENST00000486420 PRR33A8MZF0 331 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 M0QYV0 167 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 SLC9A3R1O14745 358 aaPredicted RBP13.06□□□□□ -0.32
C9orf16-202ENST00000486420 SOAT2O75908 522 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 TCF3P15923 654 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 SOX5P35711 763 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 KPNA1P52294 538 aaPredicted RBP13.06□□□□□ -0.32
C9orf16-202ENST00000486420 KIF11P52732 1056 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 POLR2FP61218 127 aaKnown RBP13.06□□□□□ -0.32
C9orf16-202ENST00000486420 AMPD2Q01433 879 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 TAF10Q12962 218 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 MTA1Q13330 715 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 NR1I3Q14994 352 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 RAB41Q5JT25 222 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 HECTD3Q5T447 861 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 GAREM2Q75VX8 874 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 RNF135Q8IUD6 432 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 ZDHHC17Q8IUH5 632 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 YAF2Q8IY57 180 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 HS6ST3Q8IZP7 471 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 CMTM8Q8IZV2 173 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 TMEM35BQ8NCS4 154 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 ITFG1Q8TB96 612 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 ZSCAN18Q8TBC5 510 aaPredicted RBP13.06□□□□□ -0.32
C9orf16-202ENST00000486420 IPO4Q8TEX9 1081 aaKnown RBP13.06□□□□□ -0.32
C9orf16-202ENST00000486420 ASB16Q96NS5 453 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 MYADMQ96S97 322 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 KCNK16Q96T55 309 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 LRFN3Q9BTN0 628 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 NACA2Q9H009 215 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 GANQ9H2C0 597 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 IL21Q9HBE4 155 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 C11orf16Q9NQ32 467 aa13.06□□□□□ -0.32
C9orf16-202ENST00000486420 TRPV5Q9NQA5 729 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms