RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 ASNSD1Q9NWL6 643 aa13.95□□□□□ -0.18
VTI1BP1-201ENST00000486325 COMMD8Q9NX08 183 aa13.95□□□□□ -0.18
VTI1BP1-201ENST00000486325 AFF4Q9UHB7 1163 aaKnown RBP13.95□□□□□ -0.18
VTI1BP1-201ENST00000486325 MSRAQ9UJ68 235 aa13.95□□□□□ -0.18
VTI1BP1-201ENST00000486325 ANAPC7Q9UJX3 599 aa13.95□□□□□ -0.18
VTI1BP1-201ENST00000486325 CAPN6Q9Y6Q1 641 aa13.95□□□□□ -0.18
VTI1BP1-201ENST00000486325 VWA8A3KMH1 1905 aa13.95□□□□□ -0.18
VTI1BP1-201ENST00000486325 PTPRSQ13332 1948 aa13.95□□□□□ -0.18
VTI1BP1-201ENST00000486325 FAM170AA1A519 330 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 LCHNA4D1U4 455 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 GRID2IPA4D2P6 1211 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 MTMR11A4FU01 709 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 PAPSS1O43252 624 aaPredicted RBP13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 BUB1BO60566 1050 aaPredicted RBP13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 LILRB3O75022 631 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 ABLIM3O94929 683 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 HAPLN1P10915 354 aaPredicted RBP13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 LCP1P13796 627 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 PRLRP16471 622 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 NDUFV1P49821 464 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 TKTL1P51854 596 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 RABGGTBP53611 331 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 MRPS5P82675 430 aaKnown RBP13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 ROR1Q01973 937 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 MESDQ14696 234 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 RAB30Q15771 203 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 CCDC142Q17RM4 750 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 PDE12Q6L8Q7 609 aaKnown RBP13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 RSPO2Q6UXX9 243 aaPredicted RBP13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 RNF19BQ6ZMZ0 732 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 FAM183BPQ6ZVS7 135 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 SLC26A9Q7LBE3 791 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 TMC7Q7Z402 723 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 SCN4BQ8IWT1 228 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 ATAD1Q8NBU5 361 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 ZMIZ2Q8NF64 920 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 SPATA17Q96L03 361 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 TRIM62Q9BVG3 475 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 EMILIN2Q9BXX0 1053 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 NGRNQ9NPE2 291 aaKnown RBP13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 EHD2Q9NZN4 543 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 IRAK3Q9Y616 596 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 ALG6Q9Y672 507 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 TSC2P49815 1807 aa13.94□□□□□ -0.18
VTI1BP1-201ENST00000486325 MIF4GDA9UHW6 222 aaKnown RBP13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 HHLA1C9JL84 531 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 F8VP50 259 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 H0YGN5 161 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 PROSCO94903 275 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 RTN3O95197 1032 aaPredicted RBP13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 ZBED1O96006 694 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 C1RP00736 705 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 ATF2P15336 505 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 ELF1P32519 619 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 MAN1A1P33908 653 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 RFC1P35251 1148 aaPredicted RBP13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 ERVK-21P61565 698 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 ADIGQ0VDE8 80 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 RPS6KA1Q15418 735 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 MEI1Q5TIA1 1274 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 PM20D1Q6GTS8 502 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 OLFML1Q6UWY5 402 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 NUP93Q8N1F7 819 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 SPPL3Q8TCT6 385 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 GOLGA1Q92805 767 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 MCEEQ96PE7 176 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 FBXO44Q9H4M3 255 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 TMEM51Q9NW97 253 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 TJP2Q9UDY2 1190 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 CHORDC1Q9UHD1 332 aaPredicted RBP13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 TMEM59LQ9UK28 342 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 USP3Q9Y6I4 520 aa13.93□□□□□ -0.18
VTI1BP1-201ENST00000486325 WDR27A2RRH5 827 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 GRXCR1A8MXD5 290 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 HSF2BPO75031 334 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 GABBR2O75899 941 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 RPL17P18621 184 aaKnown RBP13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 RGS19P49795 217 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 CACNA2D1P54289 1103 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 RPL7AP62424 266 aaKnown RBP13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 YWHAZP63104 245 aaKnown RBP13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 ADCY1Q08828 1119 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 DUSP4Q13115 394 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 SMC1AQ14683 1233 aaKnown RBP13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 MGAT5BQ3V5L5 792 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 PAPD7Q5XG87 772 aaKnown RBP13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 NT5DC3Q86UY8 548 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 UBL4BQ8N7F7 174 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 NIPA2Q8N8Q9 360 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 PGLYRP2Q96PD5 576 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 RHOBTB2Q9BYZ6 727 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 RRAGDQ9NQL2 400 aaPredicted RBP13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 METTL5Q9NRN9 209 aaKnown RBP13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 CEP290O15078 2479 aa13.92□□□□□ -0.18
VTI1BP1-201ENST00000486325 TMEM110-MUSTN1A8MSY1 372 aa13.91□□□□□ -0.18
VTI1BP1-201ENST00000486325 PIK3R2O00459 728 aa13.91□□□□□ -0.18
VTI1BP1-201ENST00000486325 TNFRSF10BO14763 440 aa13.91□□□□□ -0.18
VTI1BP1-201ENST00000486325 ADAM12O43184 909 aa13.91□□□□□ -0.18
VTI1BP1-201ENST00000486325 SPOPO43791 374 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms