RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 ADCY8P40145 1251 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 LHX1P48742 406 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 GYS2P54840 703 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 SLC8A3P57103 927 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 PLCB3Q01970 1234 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 SNX1Q13596 522 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 ZFYVE27Q5T4F4 411 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 TRNP1Q6NT89 227 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 ZNF771Q7L3S4 317 aaPredicted RBP12.53□□□□□ -0.4
PKP4-213ENST00000486254 PCGF5Q86SE9 256 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 ZCCHC9Q8N567 271 aaKnown RBP12.53□□□□□ -0.4
PKP4-213ENST00000486254 PXYLP1Q8TE99 480 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 KHSRPQ92945 711 aaKnown RBP eCLIP12.53□□□□□ -0.4
PKP4-213ENST00000486254 TLCD1Q96CP7 247 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 FAF2Q96CS3 445 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 ZIC5Q96T25 663 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 ZNF670Q9BS34 389 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 TSEN34Q9BSV6 310 aaKnown RBP12.53□□□□□ -0.4
PKP4-213ENST00000486254 SEZ6LQ9BYH1 1024 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
PKP4-213ENST00000486254 AAASQ9NRG9 546 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 SRRDQ9UH36 339 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 DNPEPQ9ULA0 475 aa12.53□□□□□ -0.4
PKP4-213ENST00000486254 ARHGEF37A1IGU5 675 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 MOXD2PA6NHM9 499 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 PI4K2BG5E9Z4 385 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 DNALI1O14645 258 aaPredicted RBP12.52□□□□□ -0.4
PKP4-213ENST00000486254 FGFR1P11362 822 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 KRT10P13645 584 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 PRKAR2AP13861 404 aaKnown RBP12.52□□□□□ -0.4
PKP4-213ENST00000486254 ITGA8P53708 1063 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 IFFO1Q0D2I5 559 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 TNFAIP8L3Q5GJ75 292 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 EFHC1Q5JVL4 640 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 LEKR1Q6ZMV7 388 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 STRADAQ7RTN6 431 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 CAPS2Q9BXY5 557 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 DUSP16Q9BY84 665 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 PPCSQ9HAB8 311 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 FAM49BQ9NUQ9 324 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 KLK14Q9P0G3 267 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 ANAPC5Q9UJX4 755 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 ZNF148Q9UQR1 794 aa12.52□□□□□ -0.4
PKP4-213ENST00000486254 COL4A4P53420 1690 aaPredicted RBP12.52□□□□□ -0.4
PKP4-213ENST00000486254 GRIN2DO15399 1336 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 TSC2P49815 1807 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.52□□□□□ -0.41
PKP4-213ENST00000486254 A0A0U1RQF3 1178 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 CFAP69A5D8W1 941 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 CST8O60676 142 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 ZNF189O75820 626 aaPredicted RBP12.52□□□□□ -0.41
PKP4-213ENST00000486254 TTC4O95801 387 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 IVLP07476 585 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 TGM2P21980 687 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 KCNA10Q16322 511 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 PTGISQ16647 500 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 TRIM71Q2Q1W2 868 aaKnown RBP12.52□□□□□ -0.41
PKP4-213ENST00000486254 KRT71Q3SY84 523 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 CCDC14Q49A88 953 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 C6orf118Q5T5N4 469 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 IZUMO3Q5VZ72 239 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 RNF180Q86T96 592 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 KCTD6Q8NC69 237 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 ACTL9Q8TC94 416 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 WNT8BQ93098 351 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 PGBD4Q96DM1 585 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 UROC1Q96N76 676 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 TTC25Q96NG3 672 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 PEBP4Q96S96 227 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 SEMA4AQ9H3S1 761 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 DPEP3Q9H4B8 488 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 CNOT10Q9H9A5 744 aaKnown RBP12.52□□□□□ -0.41
PKP4-213ENST00000486254 GPBP1L1Q9HC44 474 aaPredicted RBP12.52□□□□□ -0.41
PKP4-213ENST00000486254 KLHL11Q9NVR0 708 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 RCOR3Q9P2K3 495 aaPredicted RBP12.52□□□□□ -0.41
PKP4-213ENST00000486254 DDX20Q9UHI6 824 aaKnown RBP12.52□□□□□ -0.41
PKP4-213ENST00000486254 PTCH2Q9Y6C5 1203 aa12.52□□□□□ -0.41
PKP4-213ENST00000486254 CYB561D2O14569 222 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 MCF2LO15068 1137 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 EIF3HO15372 352 aaKnown RBP eCLIP12.51□□□□□ -0.41
PKP4-213ENST00000486254 GABBR2O75899 941 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 FBXO21O94952 628 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 AGTP01019 485 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 CYP11A1P05108 521 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 NPR3P17342 541 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 STIP1P31948 543 aaKnown RBP12.51□□□□□ -0.41
PKP4-213ENST00000486254 CDR1P51861 262 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 OTUD4Q01804 1114 aaKnown RBP12.51□□□□□ -0.41
PKP4-213ENST00000486254 GRIK3Q13003 919 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 DPYSL3Q14195 570 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 SLC29A2Q14542 456 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 NOMO1Q15155 1222 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 DPYSL2Q16555 572 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 CCDC142Q17RM4 750 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 KAZNQ674X7 775 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 AGMOQ6ZNB7 445 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 GSTA5Q7RTV2 222 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 BNIPLQ7Z465 357 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 FUKQ8N0W3 1084 aa12.51□□□□□ -0.41
PKP4-213ENST00000486254 PPP1R13LQ8WUF5 828 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms