RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 STKLD1Q8NE28 680 aa13.72□□□□□ -0.21
SSR4-211ENST00000486204 FGF14Q92915 247 aa13.72□□□□□ -0.21
SSR4-211ENST00000486204 PSMG2Q969U7 264 aa13.72□□□□□ -0.21
SSR4-211ENST00000486204 NT5C1BQ96P26 610 aa13.72□□□□□ -0.21
SSR4-211ENST00000486204 B3GNT5Q9BYG0 378 aa13.72□□□□□ -0.21
SSR4-211ENST00000486204 ZNF518BQ9C0D4 1074 aa13.72□□□□□ -0.21
SSR4-211ENST00000486204 NDST4Q9H3R1 872 aa13.72□□□□□ -0.21
SSR4-211ENST00000486204 FAM124BQ9H5Z6 455 aaPredicted RBP13.72□□□□□ -0.21
SSR4-211ENST00000486204 ZNF334Q9HCZ1 680 aaPredicted RBP13.72□□□□□ -0.21
SSR4-211ENST00000486204 MAGEC2Q9UBF1 373 aaPredicted RBP13.72□□□□□ -0.21
SSR4-211ENST00000486204 ZFP37Q9Y6Q3 630 aaPredicted RBP13.72□□□□□ -0.21
SSR4-211ENST00000486204 TICRRQ7Z2Z1 1910 aa13.72□□□□□ -0.21
SSR4-211ENST00000486204 ASPMQ8IZT6 3477 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 CLDN5O00501 218 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 NCAM2O15394 837 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 LRP3O75074 770 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 MOSPD3O75425 235 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 RETP07949 1114 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 PTPN2P17706 415 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 SLC9A1P19634 815 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 ACO1P21399 889 aaKnown RBP13.71□□□□□ -0.21
SSR4-211ENST00000486204 BDNFP23560 247 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 ALDH1A3P47895 512 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 RAD23BP54727 409 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 EPHB3P54753 998 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 CYP27A1Q02318 531 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 CETN1Q12798 172 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 KRT31Q15323 416 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 VWA3BQ502W6 1294 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 DPY19L2P1Q6NXN4 242 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 TRIM65Q6PJ69 517 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 VSTM1Q6UX27 236 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 PRR23CQ6ZRP0 262 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 APTXQ7Z2E3 356 aaKnown RBP13.71□□□□□ -0.21
SSR4-211ENST00000486204 FAM35AQ86V20 835 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 FUKQ8N0W3 1084 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 SLC4A11Q8NBS3 891 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 ITFG1Q8TB96 612 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 CLDN23Q96B33 292 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 TNIP3Q96KP6 325 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 KREMEN1Q96MU8 473 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 NELL2Q99435 816 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 CORO1BQ9BR76 489 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 CRACR2AQ9BSW2 395 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 NT5C1AQ9BXI3 368 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 SIX2Q9NPC8 291 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 PRMT8Q9NR22 394 aaPredicted RBP13.71□□□□□ -0.21
SSR4-211ENST00000486204 SEMA4GQ9NTN9 838 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 TAB2Q9NYJ8 693 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 ASB3Q9Y575 518 aa13.71□□□□□ -0.21
SSR4-211ENST00000486204 MIA3Q5JRA6 1907 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 COL4A3Q01955 1670 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 GDF9O60383 454 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 CCDC130P13994 396 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 PRKCSHP14314 528 aaPredicted RBP13.7□□□□□ -0.22
SSR4-211ENST00000486204 HMGA1P17096 107 aaKnown RBP13.7□□□□□ -0.22
SSR4-211ENST00000486204 FSHRP23945 695 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 TBXAS1P24557 533 aaPredicted RBP13.7□□□□□ -0.22
SSR4-211ENST00000486204 RPS9P46781 194 aaKnown RBP13.7□□□□□ -0.22
SSR4-211ENST00000486204 NRLP54845 237 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 PFKPQ01813 784 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 APBA1Q02410 837 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 GCNT1Q02742 428 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 IQCB1Q15051 598 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 DDR2Q16832 855 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 SDHAF4Q5VUM1 108 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 IL31Q6EBC2 164 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 PRR23BQ6ZRT6 265 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 DNAJB7Q7Z6W7 309 aaPredicted RBP13.7□□□□□ -0.22
SSR4-211ENST00000486204 PPM1KQ8N3J5 372 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 TTC39CQ8N584 583 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 C12orf29Q8N999 325 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 GIPC2Q8TF65 315 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 TCEAL4Q96EI5 215 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 ZNF512Q96ME7 567 aaPredicted RBP13.7□□□□□ -0.22
SSR4-211ENST00000486204 IL21Q9HBE4 155 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 FAM49BQ9NUQ9 324 aa13.7□□□□□ -0.22
SSR4-211ENST00000486204 LIMA1Q9UHB6 759 aaKnown RBP13.7□□□□□ -0.22
SSR4-211ENST00000486204 NOL4O94818 638 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 CEBPBP17676 345 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 TARSP26639 723 aaKnown RBP13.69□□□□□ -0.22
SSR4-211ENST00000486204 PON1P27169 355 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 ZNF165P49910 485 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 RPL10AP62906 217 aaKnown RBP13.69□□□□□ -0.22
SSR4-211ENST00000486204 KCNMA1Q12791 1236 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 MTAPQ13126 283 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 CSRP2Q16527 193 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 ZNF394Q53GI3 561 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 IQCEQ6IPM2 695 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 GJB7Q6PEY0 223 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 GBP6Q6ZN66 633 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 GAREM2Q75VX8 874 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 RRAGAQ7L523 313 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 SCN4BQ8IWT1 228 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 NPAS3Q8IXF0 933 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 ELMOD1Q8N336 334 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 LEMD2Q8NC56 503 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 ZMIZ2Q8NF64 920 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 SHKBP1Q8TBC3 707 aa13.69□□□□□ -0.22
SSR4-211ENST00000486204 SLC2A14Q8TDB8 520 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms