RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 RPGRQ92834 1020 aaKnown RBP14.13□□□□□ -0.15
C9orf78-205ENST00000480023 HAUS1Q96CS2 278 aa14.13□□□□□ -0.15
C9orf78-205ENST00000480023 STN1Q9H668 368 aaKnown RBP14.13□□□□□ -0.15
C9orf78-205ENST00000480023 USP29Q9HBJ7 922 aa14.13□□□□□ -0.15
C9orf78-205ENST00000480023 ZNF180Q9UJW8 692 aa14.13□□□□□ -0.15
C9orf78-205ENST00000480023 SYNPO2Q9UMS6 1093 aa14.13□□□□□ -0.15
C9orf78-205ENST00000480023 TCRBV7S3A2A0A539 114 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 C3orf70A6NLC5 250 aaPredicted RBP14.12□□□□□ -0.15
C9orf78-205ENST00000480023 TFAP2AP05549 437 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 ALDH18A1P54886 795 aaKnown RBP14.12□□□□□ -0.15
C9orf78-205ENST00000480023 ZFYVE27Q5T4F4 411 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 ANGEL2Q5VTE6 544 aaKnown RBP14.12□□□□□ -0.15
C9orf78-205ENST00000480023 TTC39BQ5VTQ0 682 aaPredicted RBP14.12□□□□□ -0.15
C9orf78-205ENST00000480023 SLC39A4Q6P5W5 647 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 FBXL19Q6PCT2 694 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 POLNQ7Z5Q5 900 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 SLC26A11Q86WA9 606 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 ZFPM1Q8IX07 1006 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 NIPA2Q8N8Q9 360 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 RBM17Q96I25 401 aaKnown RBP14.12□□□□□ -0.15
C9orf78-205ENST00000480023 XPO7Q9UIA9 1087 aaKnown RBP14.12□□□□□ -0.15
C9orf78-205ENST00000480023 CNTN6Q9UQ52 1028 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 TEX264Q9Y6I9 313 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 ASTN2O75129 1339 aaPredicted RBP14.12□□□□□ -0.15
C9orf78-205ENST00000480023 LRRC37AA6NMS7 1700 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 A0A0J9YVX5 310 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 GNPATO15228 680 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 PFDN1O60925 122 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 UBXN2AP68543 259 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 MRPS5P82675 430 aaKnown RBP14.12□□□□□ -0.15
C9orf78-205ENST00000480023 SNAPC2Q13487 334 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 OGFRL1Q5TC84 451 aaPredicted RBP14.12□□□□□ -0.15
C9orf78-205ENST00000480023 TXNRD3NBQ6F5E7 133 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 PASD1Q8IV76 773 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 IGDCC3Q8IVU1 814 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 LRRC43Q8N309 656 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 ACTL9Q8TC94 416 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 ACTRT2Q8TDY3 377 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 ZFRQ96KR1 1074 aaKnown RBP14.12□□□□□ -0.15
C9orf78-205ENST00000480023 AGBL1Q96MI9 1066 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 MXRA8Q9BRK3 442 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 COA1Q9GZY4 146 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 PI4KBQ9UBF8 816 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 ITGA11Q9UKX5 1188 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 CHMP2BQ9UQN3 213 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 PCDHGA4Q9Y5G9 962 aa14.12□□□□□ -0.15
C9orf78-205ENST00000480023 A0A0B4J269 797 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 BIRC5O15392 142 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 C6orf222P0C671 652 aaPredicted RBP14.11□□□□□ -0.15
C9orf78-205ENST00000480023 GNA15P30679 374 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 ELK3P41970 407 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 QARSP47897 775 aaKnown RBP14.11□□□□□ -0.15
C9orf78-205ENST00000480023 OTUD4Q01804 1114 aaKnown RBP14.11□□□□□ -0.15
C9orf78-205ENST00000480023 FOLH1Q04609 750 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 DEUP1Q05D60 604 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 TUBB3Q13509 450 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 UBAP2LQ14157 1087 aaKnown RBP14.11□□□□□ -0.15
C9orf78-205ENST00000480023 PIGHQ14442 188 aaPredicted RBP14.11□□□□□ -0.15
C9orf78-205ENST00000480023 CHI3L2Q15782 390 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 TAZQ16635 292 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 DBN1Q16643 649 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 LRRC36Q1X8D7 754 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 BRDTQ58F21 947 aaPredicted RBP14.11□□□□□ -0.15
C9orf78-205ENST00000480023 WDR44Q5JSH3 913 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 RABGAP1LQ5R372 815 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 BORAQ6PGQ7 559 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 C1orf228Q6PIY5 440 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 BBS12Q6ZW61 710 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 TMC7Q7Z402 723 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 GPD1LQ8N335 351 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 SHKBP1Q8TBC3 707 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 SLC26A7Q8TE54 656 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 ARHGEF1Q92888 912 aaKnown RBP14.11□□□□□ -0.15
C9orf78-205ENST00000480023 MECRQ9BV79 373 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 GPRC5CQ9NQ84 441 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 MAD1L1Q9Y6D9 718 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 SF3B1O75533 1304 aaKnown RBP eCLIP14.11□□□□□ -0.15
C9orf78-205ENST00000480023 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.11□□□□□ -0.15
C9orf78-205ENST00000480023 ARHGAP42A6NI28 874 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 MEI4A8MW99 385 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 TRIM49D1C9J1S8 452 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 KBTBD13C9JR72 458 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 F8VP50 259 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 DHX15O43143 795 aaKnown RBP14.11□□□□□ -0.15
C9orf78-205ENST00000480023 BBOX1O75936 387 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 KRT37O76014 449 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 PGM3O95394 542 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 SNRPAP09012 282 aaKnown RBP14.11□□□□□ -0.15
C9orf78-205ENST00000480023 YWHABP31946 246 aaKnown RBP14.11□□□□□ -0.15
C9orf78-205ENST00000480023 FDFT1P37268 417 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 CREB5Q02930 508 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 TRIP10Q15642 601 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 USP41Q3LFD5 358 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 ZACNQ401N2 412 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 KLHDC10Q6PID8 442 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 RBM44Q6ZP01 1051 aaKnown RBP14.11□□□□□ -0.15
C9orf78-205ENST00000480023 ARCQ7LC44 396 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 CCDC33Q8N5R6 958 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 ICA1LQ8NDH6 482 aa14.11□□□□□ -0.15
C9orf78-205ENST00000480023 ZNF516Q92618 1163 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms