RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 CFIP05156 583 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 HAPLN1P10915 354 aaPredicted RBP16.68■□□□□ 0.26
HDLBP-238ENST00000479894 HARSP12081 509 aaKnown RBP16.68■□□□□ 0.26
HDLBP-238ENST00000479894 HMGA1P17096 107 aaKnown RBP16.68■□□□□ 0.26
HDLBP-238ENST00000479894 PPP1R2P41236 205 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 NCKAP1LP55160 1127 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 DPYDQ12882 1025 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 CUL4BQ13620 913 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 ZNF77Q15935 545 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 HSF5Q4G112 596 aaPredicted RBP16.68■□□□□ 0.26
HDLBP-238ENST00000479894 C2orf27AQ580R0 203 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 TXNDC8Q6A555 127 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 ARMCX6Q7L4S7 300 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 MINDY1Q8N5J2 469 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 OR10T2Q8NGX3 314 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 GIPC2Q8TF65 315 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 BLZF1Q9H2G9 400 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 TMEM206Q9H813 350 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 POLD4Q9HCU8 107 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 RAXQ9Y2V3 346 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 KALRNO60229 2985 aa16.68■□□□□ 0.26
HDLBP-238ENST00000479894 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.67■□□□□ 0.26
HDLBP-238ENST00000479894 SFI1A8K8P3 1242 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 K7ENM7 598 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 AP5Z1O43299 807 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 FTH1P19P0C7X4 201 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 CSH1P0DML2 217 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 CSH2P0DML3 217 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 ITPKAP23677 461 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 NMT1P30419 496 aaKnown RBP16.67■□□□□ 0.26
HDLBP-238ENST00000479894 LILRA4P59901 499 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 USP4Q13107 963 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 MAP7D1Q3KQU3 841 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 SLC39A12Q504Y0 691 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 FAM26FQ5R3K3 315 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 TMEM92Q6UXU6 159 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 ZNF720Q7Z2F6 126 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 SFR1Q86XK3 245 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 MDM1Q8TC05 714 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 RLN3Q8WXF3 142 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 ZBTB45Q96K62 511 aaPredicted RBP16.67■□□□□ 0.26
HDLBP-238ENST00000479894 SENP8Q96LD8 212 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 CLSTN2Q9H4D0 955 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 POLMQ9NP87 494 aaPredicted RBP16.67■□□□□ 0.26
HDLBP-238ENST00000479894 DSEQ9UL01 958 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 PCDHB9Q9Y5E1 797 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 UBE4BO95155 1302 aa16.67■□□□□ 0.26
HDLBP-238ENST00000479894 ARHGAP33O14559 1287 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 EIF3DO15371 548 aaKnown RBP eCLIP16.66■□□□□ 0.26
HDLBP-238ENST00000479894 SLC16A4O15374 487 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 RHOBTB3O94955 611 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 LETM1O95202 739 aaPredicted RBP16.66■□□□□ 0.26
HDLBP-238ENST00000479894 SYPP08247 313 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 CLTAP09496 248 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 CXCL8P10145 99 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 TCF3P15923 654 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 SNRPFP62306 86 aaKnown RBP16.66■□□□□ 0.26
HDLBP-238ENST00000479894 GTF2BQ00403 316 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 MCL1Q07820 350 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 STIM1Q13586 685 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 ZPBP2Q6X784 338 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 TRIML1Q8N9V2 468 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 TMEM161BQ8NDZ6 487 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 ACCSQ96QU6 501 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 UBL7Q96S82 380 aaPredicted RBP16.66■□□□□ 0.26
HDLBP-238ENST00000479894 UXTQ9UBK9 157 aaPredicted RBP16.66■□□□□ 0.26
HDLBP-238ENST00000479894 APOBEC2Q9Y235 224 aaKnown RBP16.66■□□□□ 0.26
HDLBP-238ENST00000479894 WNT6Q9Y6F9 365 aa16.66■□□□□ 0.26
HDLBP-238ENST00000479894 ATXN2Q99700 1313 aaKnown RBP16.66■□□□□ 0.26
HDLBP-238ENST00000479894 KNTC1P50748 2209 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 GCNT3O95395 438 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 NFATC1O95644 943 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 HNRNPLP14866 589 aaKnown RBP eCLIP16.65■□□□□ 0.26
HDLBP-238ENST00000479894 OPRD1P41143 372 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 SEC13P55735 322 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 PPP2R3AQ06190 1150 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 SPAG1Q07617 926 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 PNOCQ13519 176 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 KYAT1Q16773 422 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 KLHL40Q2TBA0 621 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 KMT5BQ4FZB7 885 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 SEZ6Q53EL9 994 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 CCDC183Q5T5S1 534 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 GLRX5Q86SX6 157 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 TTC30AQ86WT1 665 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 GRAMD1CQ8IYS0 662 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 CCDC33Q8N5R6 958 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 SPATA20Q8TB22 786 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 GOLGA5Q8TBA6 731 aa16.65■□□□□ 0.26
HDLBP-238ENST00000479894 CGNQ9P2M7 1197 aaKnown RBP16.65■□□□□ 0.26
HDLBP-238ENST00000479894 A0A087WV48 116 aa16.64■□□□□ 0.25
HDLBP-238ENST00000479894 CLDN3O15551 220 aa16.64■□□□□ 0.25
HDLBP-238ENST00000479894 GJB3O75712 270 aa16.64■□□□□ 0.25
HDLBP-238ENST00000479894 USP17L7P0C7H9 530 aa16.64■□□□□ 0.25
HDLBP-238ENST00000479894 EOGTQ5NDL2 527 aa16.64■□□□□ 0.25
HDLBP-238ENST00000479894 SPATA1Q5VX52 437 aa16.64■□□□□ 0.25
HDLBP-238ENST00000479894 SLFN12LQ6IEE8 588 aa16.64■□□□□ 0.25
HDLBP-238ENST00000479894 SLC36A4Q6YBV0 504 aa16.64■□□□□ 0.25
HDLBP-238ENST00000479894 SCUBE3Q8IX30 993 aa16.64■□□□□ 0.25
HDLBP-238ENST00000479894 EFCAB13Q8IY85 973 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms