RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 HOXA3O43365 443 aaPredicted RBP8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 AHCYL1O43865 530 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 TOM1O60784 492 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 ZBED4O75132 1171 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 CHRM3P20309 590 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 TSHZ3Q63HK5 1081 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 ABLIM2Q6H8Q1 611 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 MED25Q71SY5 747 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 Q8N3U1 123 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 FITM2Q8N6M3 262 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 SMCR8Q8TEV9 937 aaPredicted RBP8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 FAM227BQ96M60 508 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 NUDT16L1Q9BRJ7 211 aaKnown RBP8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 MCOLN1Q9GZU1 580 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 FAM83DQ9H4H8 585 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 VSX1Q9NZR4 365 aaPredicted RBP8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 PI4KBQ9UBF8 816 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 KCND3Q9UK17 655 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 C19orf53Q9UNZ5 99 aaPredicted RBP8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 CNPY2Q9Y2B0 182 aa8.3□□□□□ -1.08
GAPVD1-217ENST00000479511 UBE2QL1A1L167 161 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 TBKBP1A7MCY6 615 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 RASAL1O95294 804 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 VIPP01282 170 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 ITGB7P26010 798 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 RPL13P26373 211 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 DRG2P55039 364 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 SLFN5Q08AF3 891 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 IQCB1Q15051 598 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 SMAD1Q15797 465 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 PTCHD3Q3KNS1 767 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 ATG16L1Q676U5 607 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 SYT13Q7L8C5 426 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 KRT77Q7Z794 578 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 CHD1LQ86WJ1 897 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 ABI1Q8IZP0 508 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 LSMEM1Q8N8F7 131 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 ZMIZ2Q8NF64 920 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 BPIFB1Q8TDL5 484 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 FNIP1Q8TF40 1166 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 GRAMD1AQ96CP6 724 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 GPR20Q99678 358 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 LSM14BQ9BX40 385 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 PRDM13Q9H4Q3 707 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 TMOD4Q9NZQ9 345 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 DNAJC16Q9Y2G8 782 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 RRP7AQ9Y3A4 280 aaKnown RBP8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 PMF1-BGLAPU3KQ54 211 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 UHRF1BP1Q6BDS2 1440 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 CARMIL2Q6F5E8 1435 aa8.29□□□□□ -1.08
GAPVD1-217ENST00000479511 B5MCH6 92 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 STX16-NPEPL1H3BU86 382 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 STX16O14662 325 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 TRIM13O60858 407 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 LMNAP02545 664 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 ITGB1P05556 798 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 HOXD12P35452 270 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 CCT4P50991 539 aaKnown RBP8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 ZNF134P52741 427 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 LILRA4P59901 499 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 KRT17Q04695 432 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 DLX2Q07687 328 aaPredicted RBP8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 GPS1Q13098 491 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 FHL3Q13643 280 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 ERV3-1Q14264 604 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 KCNMB1Q16558 191 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 CCNG2Q16589 344 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 NOMO2Q5JPE7 1267 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 ATXN7L2Q5T6C5 722 aaPredicted RBP8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 ZSWIM9Q86XI8 627 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 RNF169Q8NCN4 708 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 BRD8Q9H0E9 1235 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 CNTN6Q9UQ52 1028 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 DERAQ9Y315 318 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 CYP46A1Q9Y6A2 500 aa8.28□□□□□ -1.08
GAPVD1-217ENST00000479511 TNIKQ9UKE5 1360 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 PI4KAP2A4QPH2 592 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 SPTLC2O15270 562 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 PEX10O60683 326 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 TAF5LO75529 589 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 CYP21A2P08686 494 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 COPB2P35606 906 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 KRT20P35900 424 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 POLD2P49005 469 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 NAP1L1P55209 391 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 RNF151Q2KHN1 245 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 ALDH1L2Q3SY69 923 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 MGAT5BQ3V5L5 792 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 GALNTL6Q49A17 601 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 ENOSF1Q7L5Y1 443 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 ATG4DQ86TL0 474 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 CFAP52Q8N1V2 620 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 NSUN7Q8NE18 718 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 ADAMTS15Q8TE58 950 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 RABGGTAQ92696 567 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 LRIG1Q96JA1 1093 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 MOGAT1Q96PD6 335 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 LMAN2LQ9H0V9 348 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 GHITMQ9H3K2 345 aa8.27□□□□□ -1.09
GAPVD1-217ENST00000479511 ACAD9Q9H845 621 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms