RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ZNF513Q8N8E2 541 aaPredicted RBP7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 IPO4Q8TEX9 1081 aaKnown RBP7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 TTC9Q92623 222 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 TNFRSF25Q93038 417 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 TMEM176AQ96HP8 235 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 MRGPRX1Q96LB2 322 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 NTPCRQ9BSD7 190 aaKnown RBP7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 HAPLN2Q9GZV7 340 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 WSB2Q9NYS7 404 aaPredicted RBP7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 GMIPQ9P107 970 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 DSEQ9UL01 958 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 STARD13Q9Y3M8 1113 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 RBM19Q9Y4C8 960 aaKnown RBP7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 FARP1Q9Y4F1 1045 aaPredicted RBP7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 PCDHGA1Q9Y5H4 931 aa7.89□□□□□ -1.15
SPTLC1-205ENST00000477888 ARID2Q68CP9 1835 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 ANO9A1A5B4 782 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 METTL12A8MUP2 240 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 BTBD18B2RXH4 712 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 CYB561D2O14569 222 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 PCDHGA12O60330 932 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 RPS6KB1P23443 525 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 CYP2F1P24903 491 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 CD6P30203 668 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 NTSR1P30989 418 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 TNFSF9P41273 254 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 WASP42768 502 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 GRK6P43250 576 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 CLDN6P56747 220 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 SLC7A9P82251 487 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 KDSRQ06136 332 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 NR5A1Q13285 461 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 KCNB1Q14721 858 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 NOLC1Q14978 699 aaKnown RBP eCLIP7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 CCDC157Q569K6 752 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 C9orf57Q5W0N0 161 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 WSCD1Q658N2 575 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 BLOC1S2Q6QNY1 142 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 ERICH1Q86X53 443 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 METTL23Q86XA0 190 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 ETFBKMTQ8IXQ9 262 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 DCP1BQ8IZD4 617 aaKnown RBP7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 CADM4Q8NFZ8 388 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 MED8Q96G25 268 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 JAKMIP1Q96N16 626 aaKnown RBP7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 TSPAN18Q96SJ8 248 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 ACOX2Q99424 681 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 GABRG3Q99928 467 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 RNF38Q9H0F5 515 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 SLC6A17Q9H1V8 727 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 TMEM60Q9H2L4 133 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 BHMT2Q9H2M3 363 aa7.88□□□□□ -1.15
SPTLC1-205ENST00000477888 UBR5O95071 2799 aaPredicted RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 A0A1B0GVT2 93 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 SLC9A3R1O14745 358 aaPredicted RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 CPLX1O14810 134 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 CLDN3O15551 220 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 ZBTB24O43167 697 aaPredicted RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 XPOTO43592 962 aaKnown RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 FAM189A1O60320 539 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 BRINP1O60477 761 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 NEMFO60524 1076 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 TULP3O75386 442 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 ADH1CP00326 375 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 ADH5P11766 374 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 NCAM1P13591 858 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 PFKLP17858 780 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 ADSSP30520 456 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 HNF1BP35680 557 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 CSNK1EP49674 416 aaKnown RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 PDE6CP51160 858 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 RPL10AP62906 217 aaKnown RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 PPP2R3AQ06190 1150 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 CCDC173Q0VFZ6 552 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 TOB2Q14106 344 aaPredicted RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 ECM1Q16610 540 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 NFE2Q16621 373 aaPredicted RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 KIF19Q2TAC6 998 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 ZPBP2Q6X784 338 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 METTL3Q86U44 580 aaKnown RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 FSIP1Q8NA03 581 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 LEO1Q8WVC0 666 aaPredicted RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 SNRNP27Q8WVK2 155 aaKnown RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 TOE1Q96GM8 510 aaKnown RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 CCSER1Q9C0I3 900 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 MIR1-1HGQ9H1L0 117 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 ABCB6Q9NP58 842 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 KMT5AQ9NQR1 393 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 NXF1Q9UBU9 619 aaKnown RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 HELZP42694 1942 aaKnown RBP7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 MYO9AB2RTY4 2548 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 KIAA1549LQ6ZVL6 1849 aa7.87□□□□□ -1.15
SPTLC1-205ENST00000477888 PLXND1Q9Y4D7 1925 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 NOTCH2Q04721 2471 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 MYO16Q9Y6X6 1858 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 MEI4A8MW99 385 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 KCNK3O14649 394 aa7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 SCAMP3O14828 347 aaKnown RBP7.86□□□□□ -1.15
SPTLC1-205ENST00000477888 TRIM24O15164 1050 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms