RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 SRRM3A6NNA2 597 aaPredicted RBP4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 FKBP9O95302 570 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 BMP15O95972 392 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 CCDC159P0C7I6 412 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 IL2RBP14784 551 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 FPR1P21462 350 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 MCM3P25205 808 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 GUCY1A2P33402 732 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 AARSP49588 968 aaKnown RBP eCLIP4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 NOMO3P69849 1222 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 ZBED6P86452 979 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 CDK17Q00537 523 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 NOMO1Q15155 1222 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 UGT8Q16880 541 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 PLEKHO1Q53GL0 409 aaPredicted RBP4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 NOMO2Q5JPE7 1267 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 CRELD2Q6UXH1 353 aaPredicted RBP4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 FKBP9P1Q75LS8 142 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 UBE3BQ7Z3V4 1068 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 RASSF3Q86WH2 238 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 LRRC49Q8IUZ0 686 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 LRRC8AQ8IWT6 810 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 CCDC65Q8IXS2 484 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 CNNM3Q8NE01 707 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 CUL5Q93034 780 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 PPP2R3CQ969Q6 453 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 ZNF48Q96MX3 618 aaPredicted RBP4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 FCRL4Q96PJ5 515 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 RABEP2Q9H5N1 569 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 EMC7Q9NPA0 242 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 PAPOLBQ9NRJ5 636 aaKnown RBP4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 MOCS1Q9NZB8 636 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 CIDEBQ9UHD4 219 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 DDX25Q9UHL0 483 aaKnown RBP4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 TMCO1Q9UM00 188 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 TMED5Q9Y3A6 229 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 NOC2LQ9Y3T9 749 aaKnown RBP4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 WNT6Q9Y6F9 365 aa4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 POLR3AO14802 1390 aaPredicted RBP4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 AQRO60306 1485 aaKnown RBP eCLIP4.87□□□□□ -1.63
PIKFYVE-209ENST00000477200 GOLGA8AA7E2F4 631 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 GSG1L2A8MUP6 293 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 ZSCAN12O43309 604 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 ORC4O43929 436 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 ZEB2O60315 1214 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 RASSF9O75901 435 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 RNF8O76064 485 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 ONECUT2O95948 504 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 PRR35P0CG20 571 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 SRGNP10124 158 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 CYP11B2P19099 503 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 CNGA1P29973 690 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 ECHS1P30084 290 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 PTGER1P34995 402 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 AMPHP49418 695 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 IL2P60568 153 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 TFF2Q03403 129 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 SNX1Q13596 522 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 KLF9Q13886 244 aaPredicted RBP4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 KCNB1Q14721 858 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 WDR43Q15061 677 aaKnown RBP eCLIP4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 USH1GQ495M9 461 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 Q4G0T1 1027 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 SH2D4BQ5SQS7 431 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 ZNF626Q68DY1 528 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 MIS18BP1Q6P0N0 1132 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 ARMC9Q7Z3E5 817 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 LCA5Q86VQ0 697 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 SESTD1Q86VW0 696 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 PQLC1Q8N2U9 271 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 TEX9Q8N6V9 391 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 MIGA1Q8NAN2 632 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 ATP11CQ8NB49 1132 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 AFAP1L1Q8TED9 768 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 LEO1Q8WVC0 666 aaPredicted RBP4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 P3H4Q92791 437 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 GOLGA1Q92805 767 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 SLC5A5Q92911 643 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 DHTKD1Q96HY7 919 aaPredicted RBP4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 SPAG5Q96R06 1193 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 PNKPQ96T60 521 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 UHRF1Q96T88 793 aaPredicted RBP4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 MPHOSPH8Q99549 860 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 NACA2Q9H009 215 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 OSBPL2Q9H1P3 480 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 BHMT2Q9H2M3 363 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 LDAHQ9H6V9 325 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 VCPKMTQ9H867 229 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 ZWILCHQ9H900 591 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 ZCCHC17Q9NP64 241 aaKnown RBP4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 EXOC1Q9NV70 894 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 HOOK1Q9UJC3 728 aaKnown RBP4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 RAB21Q9UL25 225 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 ZNF510Q9Y2H8 683 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 CD2APQ9Y5K6 639 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 CAPN7Q9Y6W3 813 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 CCDC141Q6ZP82 1450 aa4.86□□□□□ -1.63
PIKFYVE-209ENST00000477200 BICDL2A1A5D9 508 aa4.85□□□□□ -1.63
PIKFYVE-209ENST00000477200 TMEM221A6NGB7 291 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms