RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 AEBP2Q6ZN18 517 aaPredicted RBP29.36■■■□□ 2.29
PIKFYVE-209ENST00000477200 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
PIKFYVE-209ENST00000477200 SENP3Q9H4L4 574 aaPredicted RBP24.98■■□□□ 1.59
PIKFYVE-209ENST00000477200 PHF23Q9BUL5 403 aaPredicted RBP24.68■■□□□ 1.54
PIKFYVE-209ENST00000477200 FOXD1Q16676 465 aa23.36■■□□□ 1.33
PIKFYVE-209ENST00000477200 PLPPR3Q6T4P5 718 aa22.01■■□□□ 1.11
PIKFYVE-209ENST00000477200 MSH5O43196 834 aa21.85■■□□□ 1.09
PIKFYVE-209ENST00000477200 PIAS4Q8N2W9 510 aaPredicted RBP21.76■■□□□ 1.07
PIKFYVE-209ENST00000477200 PPP6R1Q9UPN7 881 aa21.76■■□□□ 1.07
PIKFYVE-209ENST00000477200 ADRA2BP18089 450 aa21.66■■□□□ 1.06
PIKFYVE-209ENST00000477200 POTEDQ86YR6 584 aa21.65■■□□□ 1.06
PIKFYVE-209ENST00000477200 MAPK8IP2Q13387 824 aaPredicted RBP19.97■□□□□ 0.79
PIKFYVE-209ENST00000477200 DMRT2Q9Y5R5 561 aa19.8■□□□□ 0.76
PIKFYVE-209ENST00000477200 SCAF1Q9H7N4 1312 aaKnown RBP19.73■□□□□ 0.75
PIKFYVE-209ENST00000477200 PPP4R3CPQ6ZMV5 832 aa19.31■□□□□ 0.68
PIKFYVE-209ENST00000477200 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
PIKFYVE-209ENST00000477200 DCAF8L1A6NGE4 600 aa18.99■□□□□ 0.63
PIKFYVE-209ENST00000477200 CNKSR2Q8WXI2 1034 aa18.96■□□□□ 0.63
PIKFYVE-209ENST00000477200 CACNB1Q02641 598 aaPredicted RBP18.87■□□□□ 0.61
PIKFYVE-209ENST00000477200 RNF216Q9NWF9 866 aaPredicted RBP18.83■□□□□ 0.6
PIKFYVE-209ENST00000477200 RNF39Q9H2S5 420 aa18.67■□□□□ 0.58
PIKFYVE-209ENST00000477200 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
PIKFYVE-209ENST00000477200 C1QBPQ07021 282 aaKnown RBP18.36■□□□□ 0.53
PIKFYVE-209ENST00000477200 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
PIKFYVE-209ENST00000477200 NPM3O75607 178 aaKnown RBP18.26■□□□□ 0.51
PIKFYVE-209ENST00000477200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.496e-9■■□□□ 12.6
PIKFYVE-209ENST00000477200 KCNA4P22459 653 aa17.78■□□□□ 0.44
PIKFYVE-209ENST00000477200 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
PIKFYVE-209ENST00000477200 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
PIKFYVE-209ENST00000477200 SLC4A2P04920 1241 aa17.5■□□□□ 0.39
PIKFYVE-209ENST00000477200 CAPN15O75808 1086 aa17.48■□□□□ 0.39
PIKFYVE-209ENST00000477200 DSG3P32926 999 aa17.44■□□□□ 0.38
PIKFYVE-209ENST00000477200 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
PIKFYVE-209ENST00000477200 APLP2Q06481 763 aa17.12■□□□□ 0.33
PIKFYVE-209ENST00000477200 ABCB7O75027 752 aa17.1■□□□□ 0.33
PIKFYVE-209ENST00000477200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
PIKFYVE-209ENST00000477200 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
PIKFYVE-209ENST00000477200 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
PIKFYVE-209ENST00000477200 SAMD1Q6SPF0 538 aaPredicted RBP17.01■□□□□ 0.31
PIKFYVE-209ENST00000477200 POTEHQ6S545 545 aa16.91■□□□□ 0.3
PIKFYVE-209ENST00000477200 MYCNP04198 464 aaPredicted RBP16.85■□□□□ 0.29
PIKFYVE-209ENST00000477200 SLC4A1APQ9BWU0 796 aaKnown RBP16.73■□□□□ 0.27
PIKFYVE-209ENST00000477200 POLA2Q14181 598 aa16.69■□□□□ 0.26
PIKFYVE-209ENST00000477200 FOXD4L1Q9NU39 408 aa16.6■□□□□ 0.25
PIKFYVE-209ENST00000477200 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
PIKFYVE-209ENST00000477200 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
PIKFYVE-209ENST00000477200 ZBTB22O15209 634 aa16.38■□□□□ 0.21
PIKFYVE-209ENST00000477200 CHRDL2Q6WN34 429 aa16.32■□□□□ 0.2
PIKFYVE-209ENST00000477200 ZBTB12Q9Y330 459 aaPredicted RBP16.26■□□□□ 0.19
PIKFYVE-209ENST00000477200 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
PIKFYVE-209ENST00000477200 OSCARQ8IYS5 282 aa16.16■□□□□ 0.18
PIKFYVE-209ENST00000477200 ATXN8OSP0DMR3 200 aa16.09■□□□□ 0.17
PIKFYVE-209ENST00000477200 REM2Q8IYK8 340 aaPredicted RBP16.07■□□□□ 0.16
PIKFYVE-209ENST00000477200 PIP4P2Q8N4L2 257 aa15.92■□□□□ 0.14
PIKFYVE-209ENST00000477200 PITPNM1O00562 1244 aa15.91■□□□□ 0.14
PIKFYVE-209ENST00000477200 FBLN2P98095 1184 aa15.82■□□□□ 0.12
PIKFYVE-209ENST00000477200 FXR2P51116 673 aaKnown RBP eCLIP15.8■□□□□ 0.12
PIKFYVE-209ENST00000477200 SPDYE2BA6NHP3 402 aa15.77■□□□□ 0.12
PIKFYVE-209ENST00000477200 SPDYE6P0CI01 402 aa15.77■□□□□ 0.12
PIKFYVE-209ENST00000477200 MKRN4PQ13434 485 aaPredicted RBP15.77■□□□□ 0.12
PIKFYVE-209ENST00000477200 SPDYE2Q495Y8 402 aa15.77■□□□□ 0.12
PIKFYVE-209ENST00000477200 SP7Q8TDD2 431 aaPredicted RBP15.77■□□□□ 0.12
PIKFYVE-209ENST00000477200 HAX1O00165 279 aa15.65■□□□□ 0.1
PIKFYVE-209ENST00000477200 ZNF692Q9BU19 519 aaPredicted RBP15.59■□□□□ 0.09
PIKFYVE-209ENST00000477200 SSUH2Q9Y2M2 353 aa15.58■□□□□ 0.08
PIKFYVE-209ENST00000477200 CLEC11AQ9Y240 323 aa15.56■□□□□ 0.08
PIKFYVE-209ENST00000477200 SPDYE1Q8NFV5 336 aaPredicted RBP15.54■□□□□ 0.08
PIKFYVE-209ENST00000477200 EVX2Q03828 476 aa15.53■□□□□ 0.08
PIKFYVE-209ENST00000477200 PRKAR2AP13861 404 aaKnown RBP15.48■□□□□ 0.07
PIKFYVE-209ENST00000477200 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
PIKFYVE-209ENST00000477200 PABPN1Q86U42 306 aaKnown RBP eCLIP15.37■□□□□ 0.05
PIKFYVE-209ENST00000477200 CHADLQ6NUI6 762 aa15.31■□□□□ 0.04
PIKFYVE-209ENST00000477200 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
PIKFYVE-209ENST00000477200 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
PIKFYVE-209ENST00000477200 EHMT2Q96KQ7 1210 aa15.17■□□□□ 0.02
PIKFYVE-209ENST00000477200 GABBR2O75899 941 aa15.12■□□□□ 0.01
PIKFYVE-209ENST00000477200 FARP1Q9Y4F1 1045 aaPredicted RBP15.04■□□□□ -0
PIKFYVE-209ENST00000477200 CD44P16070 742 aaKnown RBP14.97□□□□□ -0.01
PIKFYVE-209ENST00000477200 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
PIKFYVE-209ENST00000477200 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
PIKFYVE-209ENST00000477200 STAG3Q9UJ98 1225 aa14.86□□□□□ -0.03
PIKFYVE-209ENST00000477200 POTEIP0CG38 1075 aa14.83□□□□□ -0.04
PIKFYVE-209ENST00000477200 LHX8Q68G74 356 aa14.82□□□□□ -0.04
PIKFYVE-209ENST00000477200 ZRANB1Q9UGI0 708 aa14.75□□□□□ -0.05
PIKFYVE-209ENST00000477200 CLCN6P51797 869 aa14.74□□□□□ -0.05
PIKFYVE-209ENST00000477200 ZNF579Q8NAF0 562 aaKnown RBP14.73□□□□□ -0.05
PIKFYVE-209ENST00000477200 DCBLD2Q96PD2 775 aa14.63□□□□□ -0.07
PIKFYVE-209ENST00000477200 MNX1P50219 401 aaPredicted RBP14.62□□□□□ -0.07
PIKFYVE-209ENST00000477200 GALR2O43603 387 aaPredicted RBP14.6□□□□□ -0.07
PIKFYVE-209ENST00000477200 NPM1P06748 294 aaKnown RBP eCLIP14.55□□□□□ -0.08
PIKFYVE-209ENST00000477200 PHF12Q96QT6 1004 aa14.55□□□□□ -0.08
PIKFYVE-209ENST00000477200 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
PIKFYVE-209ENST00000477200 PROM2Q8N271 834 aa14.54□□□□□ -0.08
PIKFYVE-209ENST00000477200 PELP1Q8IZL8 1130 aaKnown RBP14.36□□□□□ -0.11
PIKFYVE-209ENST00000477200 POTEB2H3BUK9 544 aa14.35□□□□□ -0.11
PIKFYVE-209ENST00000477200 MS4A3Q96HJ5 214 aa14.34□□□□□ -0.11
PIKFYVE-209ENST00000477200 TSPYL2Q9H2G4 693 aaPredicted RBP14.33□□□□□ -0.12
PIKFYVE-209ENST00000477200 OTUD5Q96G74 571 aa14.3□□□□□ -0.12
PIKFYVE-209ENST00000477200 ASTLQ6HA08 431 aaPredicted RBP14.27□□□□□ -0.13
PIKFYVE-209ENST00000477200 CCDC61Q9Y6R9 512 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms