RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 DNM3Q9UQ16 869 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 TBC1D30Q9Y2I9 924 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 TRAF6Q9Y4K3 522 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 TELO2Q9Y4R8 837 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 ANGPTL3Q9Y5C1 460 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 TNKSO95271 1327 aa6.28□□□□□ -1.4
ECHDC1-215ENST00000475319 NUP155O75694 1391 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 TRAV6A0A075B6T7 132 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 FAM170AA1A519 330 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 TRDMT1O14717 391 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 FYB1O15117 783 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 TBX3O15119 743 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 TRAPPC3O43617 180 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 STX10O60499 249 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 CCNT1O60563 726 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 LILRB5O75023 590 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 FGF18O76093 207 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 HLA-DRAP01903 254 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 ALOX5P09917 674 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 RHOXF2BP0C7M4 288 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 ITGA4P13612 1032 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 ZNF12P17014 697 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 PLCD1P51178 756 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 STAT2P52630 851 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 GFRA1P56159 465 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 RAC1P63000 192 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 KRT85P78386 507 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 OCRLQ01968 901 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 PRKCEQ02156 737 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 GUCY2DQ02846 1103 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 CHRNEQ04844 493 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 AUHQ13825 339 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 ANKRD1Q15327 319 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 EZH2Q15910 746 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 PPP6R3Q5H9R7 873 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 NBPF12Q5TAG4 269 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 PIK3R6Q5UE93 754 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 EMBQ6PCB8 327 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 POMZP3Q6PJE2 187 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 B3GNT6Q6ZMB0 384 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 ZNF704Q6ZNC4 412 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 UBE2R2Q712K3 238 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 BTN2A1Q7KYR7 527 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 MARK2Q7KZI7 788 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 ARHGEF39Q8N4T4 335 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 ENDOVQ8N8Q3 282 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 CCDC197Q8NCU1 140 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 OR2W6PQ8NHA6 318 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 LILRB4Q8NHJ6 448 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 GAB3Q8WWW8 586 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 KCTD13Q8WZ19 329 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 NELL1Q92832 810 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 GATA6Q92908 595 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 CDCA5Q96FF9 252 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 COX4I2Q96KJ9 171 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 CCDC138Q96M89 665 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 NLRP4Q96MN2 994 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 COG8Q96MW5 612 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 PPP1R10Q96QC0 940 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 WDR24Q96S15 920 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 RHOXF2Q9BQY4 288 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 CCDC77Q9BR77 488 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 SCAND2PQ9GZW5 306 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 NEK6Q9HC98 313 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 RIC8AQ9NPQ8 531 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 KCNK4Q9NYG8 393 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 CGGBP1Q9UFW8 167 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 RGS17Q9UGC6 210 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 KCNN3Q9UGI6 736 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 MOSPD1Q9UJG1 213 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 FBXO2Q9UK22 296 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 GRID1Q9ULK0 1009 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 PA2G4Q9UQ80 394 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 APOBEC2Q9Y235 224 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 USH1CQ9Y6N9 552 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 TRPM2O94759 1503 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 ADGRL3Q9HAR2 1447 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 TET3O43151 1660 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 AK9Q5TCS8 1911 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 NWD1Q149M9 1564 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 MYO3BQ8WXR4 1341 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 SYNGAP1Q96PV0 1343 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 MYOM2P54296 1465 aa6.27□□□□□ -1.41
ECHDC1-215ENST00000475319 ALKQ9UM73 1620 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 C17orf113A0A1B0GUU1 675 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 A0A1W2PQ67 120 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 LACTBL1A8MY62 500 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 F8W810 466 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 XPO1O14980 1071 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 STX6O43752 255 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 DDHD2O94830 711 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 CRTAMO95727 393 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 CHEK2O96017 543 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 CST3P01034 146 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 IFIT2P09913 472 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 MTHFD1P11586 935 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 RPS2P15880 293 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 MSH2P43246 934 aa6.26□□□□□ -1.41
ECHDC1-215ENST00000475319 HNRNPFP52597 415 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms