RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 GCNT4Q9P109 453 aa6.33□□□□□ -1.4
CPSF7-210ENST00000474684 NCDNQ9UBB6 729 aa6.33□□□□□ -1.4
CPSF7-210ENST00000474684 CEP295Q9C0D2 2601 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 A0A1B0GVL5 298 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 F8VP50 259 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 CLDN5O00501 218 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 KIAA0391O15091 583 aaKnown RBP6.32□□□□□ -1.4
CPSF7-210ENST00000474684 NCAM2O15394 837 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 VNN1O95497 513 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 FGF19O95750 216 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 EGFP01133 1207 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 CKMP06732 381 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 TNNI1P19237 187 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 PCSK1P29120 753 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 WEE1P30291 646 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 AVPR1AP37288 418 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 CCR3P51677 355 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 RPL10AP62906 217 aaKnown RBP6.32□□□□□ -1.4
CPSF7-210ENST00000474684 DLG4P78352 724 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 CYP27A1Q02318 531 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 FAM160A1Q05DH4 1040 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 MESP2Q0VG99 397 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 SMARCB1Q12824 385 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 STK4Q13043 487 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 RUNX3Q13761 415 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 LRRC32Q14392 662 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 TAF12Q16514 161 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 EML3Q32P44 896 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 ITPRIPL2Q3MIP1 535 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 TMEM196Q5HYL7 178 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 C1orf220Q5T0J3 134 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 SPOPLQ6IQ16 392 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 PRR23BQ6ZRT6 265 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 STXBP4Q6ZWJ1 553 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 MON1AQ86VX9 555 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 SFTPA1Q8IWL2 248 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 C12orf56Q8IXR9 622 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 SPEM1Q8N4L4 309 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 ARL14EPQ8N8R7 260 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-210ENST00000474684 IQUBQ8NA54 791 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 XXYLT1Q8NBI6 393 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 SPATA18Q8TC71 538 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 CACTINQ8WUQ7 758 aaKnown RBP6.32□□□□□ -1.4
CPSF7-210ENST00000474684 ATRIPQ8WXE1 791 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 MRPS31Q92665 395 aaKnown RBP6.32□□□□□ -1.4
CPSF7-210ENST00000474684 E2F7Q96AV8 911 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 MSANTD3Q96H12 275 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 FUBP3Q96I24 572 aaKnown RBP eCLIP6.32□□□□□ -1.4
CPSF7-210ENST00000474684 MYRFLQ96LU7 910 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 SEMA4AQ9H3S1 761 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 GOLPH3LQ9H4A5 285 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 C8orf33Q9H7E9 229 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-210ENST00000474684 KIF9Q9HAQ2 790 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 MAGEF1Q9HAY2 307 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 GKN1Q9NS71 199 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 TDP1Q9NUW8 608 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 CDH9Q9ULB4 789 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 HPSEQ9Y251 543 aa6.32□□□□□ -1.4
CPSF7-210ENST00000474684 KMT2BQ9UMN6 2715 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-210ENST00000474684 EXOC3O60645 756 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 PAPSS2O95340 614 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-210ENST00000474684 OLFM2O95897 454 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 HSP90AA1P07900 732 aaKnown RBP6.31□□□□□ -1.4
CPSF7-210ENST00000474684 CCDC130P13994 396 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 DDX6P26196 483 aaKnown RBP eCLIP6.31□□□□□ -1.4
CPSF7-210ENST00000474684 GJA4P35212 333 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 MAGEA11P43364 429 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 CXCL12P48061 93 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 LHX1P48742 406 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 MLLT6P55198 1093 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-210ENST00000474684 CDH8P55286 799 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 PLCB2Q00722 1185 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 SPEM2Q0P670 501 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 MYO1EQ12965 1108 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 BIRC3Q13489 604 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 ZNF268Q14587 947 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-210ENST00000474684 SURF1Q15526 300 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 CCDC6Q16204 474 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 KNOP1Q1ED39 458 aaKnown RBP6.31□□□□□ -1.4
CPSF7-210ENST00000474684 DUOXA2Q1HG44 320 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 RSPO4Q2I0M5 234 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-210ENST00000474684 ZNF699Q32M78 642 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 WDR72Q3MJ13 1102 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 PLA2G2CQ5R387 149 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 C4orf50Q6ZRC1 276 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 DENND5BQ6ZUT9 1274 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 PAQR9Q6ZVX9 377 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 HS2ST1Q7LGA3 356 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 FAM35AQ86V20 835 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 C12orf40Q86WS4 652 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 ZMIZ2Q8NF64 920 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 OR6B3Q8NGW1 331 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 MYCBPAPQ8TBZ2 947 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 SH3RF2Q8TEC5 729 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 WBP2Q969T9 261 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 PAGE5Q96GU1 130 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 HHIPQ96QV1 700 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 TWNKQ96RR1 684 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 FNBP1Q96RU3 617 aa6.31□□□□□ -1.4
CPSF7-210ENST00000474684 MMS19Q96T76 1030 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms