RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 CFHP08603 1231 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 CYP11B1P15538 503 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 GJA1P17302 382 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 CDC25CP30307 473 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 GBP2P32456 591 aaPredicted RBP16.63■□□□□ 0.25
COL1A1-204ENST00000474644 PLA2G4AP47712 749 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 PDE6CP51160 858 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 BPIFB4P59827 614 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 PLCB2Q00722 1185 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 TEAD2Q15562 447 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 FIGNQ5HY92 759 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 DENND1BQ6P3S1 775 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 OTOP3Q7RTS5 596 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 TDRD5Q8NAT2 981 aaKnown RBP16.63■□□□□ 0.25
COL1A1-204ENST00000474644 SCAMP5Q8TAC9 235 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 FGF13Q92913 245 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 GCNAQ96QF7 691 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 UBXN6Q9BZV1 441 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 IL37Q9NZH6 218 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 NOTCH4Q99466 2003 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 ITIH6Q6UXX5 1313 aa16.63■□□□□ 0.25
COL1A1-204ENST00000474644 FAM92AA1XBS5 289 aa16.62■□□□□ 0.25
COL1A1-204ENST00000474644 F11P03951 625 aa16.62■□□□□ 0.25
COL1A1-204ENST00000474644 YWHAQP27348 245 aa16.62■□□□□ 0.25
COL1A1-204ENST00000474644 CYP4F8P98187 520 aa16.62■□□□□ 0.25
COL1A1-204ENST00000474644 STXBP5Q5T5C0 1151 aa16.62■□□□□ 0.25
COL1A1-204ENST00000474644 POTEHQ6S545 545 aa16.62■□□□□ 0.25
COL1A1-204ENST00000474644 NOP9Q86U38 636 aaKnown RBP16.62■□□□□ 0.25
COL1A1-204ENST00000474644 EPS8L1Q8TE68 723 aa16.62■□□□□ 0.25
COL1A1-204ENST00000474644 ATXN3LQ9H3M9 355 aa16.62■□□□□ 0.25
COL1A1-204ENST00000474644 COMMD8Q9NX08 183 aa16.62■□□□□ 0.25
COL1A1-204ENST00000474644 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.62■□□□□ 0.25
COL1A1-204ENST00000474644 NOCTQ9UK39 431 aaKnown RBP16.62■□□□□ 0.25
COL1A1-204ENST00000474644 CDH7Q9ULB5 785 aa16.62■□□□□ 0.25
COL1A1-204ENST00000474644 MYO6Q9UM54 1294 aa16.62■□□□□ 0.25
COL1A1-204ENST00000474644 PCDHGC3Q9UN70 934 aa16.62■□□□□ 0.25
COL1A1-204ENST00000474644 NR2E1Q9Y466 385 aa16.62■□□□□ 0.25
COL1A1-204ENST00000474644 A0A1W2PQJ5 194 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 LRRC53A6NM62 1247 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 LOC730098B7Z3J9 87 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 GPD2P43304 727 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 TAF10Q12962 218 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 RAB41Q5JT25 222 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 PASD1Q8IV76 773 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 VSTM4Q8IW00 320 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 SLC35F5Q8WV83 523 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 DDX1Q92499 740 aaKnown RBP16.61■□□□□ 0.25
COL1A1-204ENST00000474644 FBXO32Q969P5 355 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 ACSF2Q96CM8 615 aaPredicted RBP16.61■□□□□ 0.25
COL1A1-204ENST00000474644 SLITRK1Q96PX8 696 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 NUP58Q9BVL2 599 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 EDEM3Q9BZQ6 932 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 FBXO44Q9H4M3 255 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 EPS15L1Q9UBC2 864 aa16.61■□□□□ 0.25
COL1A1-204ENST00000474644 C19orf67A6NJJ6 358 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 GYPCP04921 128 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 LAMP2P13473 410 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 KRT9P35527 623 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 RGS7P49802 495 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 KIF11P52732 1056 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 ARHGAP15Q53QZ3 475 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 TAF3Q5VWG9 929 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 SPECC1LQ69YQ0 1117 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 PMF1Q6P1K2 205 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 PDZD8Q8NEN9 1154 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 ADAMTS19Q8TE59 1207 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 SLC20A1Q8WUM9 679 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 KCTD13Q8WZ19 329 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 MRPS31Q92665 395 aaKnown RBP16.6■□□□□ 0.25
COL1A1-204ENST00000474644 IQCDQ96DY2 449 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 MCRS1Q96EZ8 462 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 NECAB3Q96P71 396 aaPredicted RBP16.6■□□□□ 0.25
COL1A1-204ENST00000474644 TRIM5Q9C035 493 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 GDE1Q9NZC3 331 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 GMIPQ9P107 970 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 CYTH4Q9UIA0 394 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 USP3Q9Y6I4 520 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 ZFP37Q9Y6Q3 630 aaPredicted RBP16.6■□□□□ 0.25
COL1A1-204ENST00000474644 NCANO14594 1321 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 GREB1Q4ZG55 1949 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 DOCK6Q96HP0 2047 aa16.6■□□□□ 0.25
COL1A1-204ENST00000474644 FERP16591 822 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 TKTL1P51854 596 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 ARID5AQ03989 594 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 ADIGQ0VDE8 80 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 GPR158Q5T848 1215 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 E4F1Q66K89 784 aaPredicted RBP16.59■□□□□ 0.25
COL1A1-204ENST00000474644 ZNF677Q86XU0 584 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 ZDHHC14Q8IZN3 488 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 C1orf131Q8NDD1 294 aaKnown RBP16.59■□□□□ 0.25
COL1A1-204ENST00000474644 OVCA2Q8WZ82 227 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 ZSWIM3Q96MP5 696 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 LHX5Q9H2C1 402 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 SLITRK6Q9H5Y7 841 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 LRRC4Q9HBW1 653 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 TRPM5Q9NZQ8 1165 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 SCML2Q9UQR0 700 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 C5orf42Q9H799 3197 aa16.59■□□□□ 0.25
COL1A1-204ENST00000474644 ZNF840PA6NDX5 716 aa16.58■□□□□ 0.24
COL1A1-204ENST00000474644 GABBR2O75899 941 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms