RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SLC4A5Q9BY07 1137 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 UBXN6Q9BZV1 441 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 FBXO44Q9H4M3 255 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 SLC28A3Q9HAS3 691 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 OSGEPQ9NPF4 335 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 CNGB3Q9NQW8 809 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 TLR9Q9NR96 1032 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 CHST7Q9NS84 486 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 ASNSD1Q9NWL6 643 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 STAP1Q9ULZ2 295 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 CAPN6Q9Y6Q1 641 aa10.8□□□□□ -0.68
PRPF38A-202ENST00000474048 GBF1Q92538 1859 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 MYO16Q9Y6X6 1858 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 A0A0U1RQJ8 604 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 LCHNA4D1U4 455 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 MTMR11A4FU01 709 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 SIGLEC16A6NMB1 481 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 MIF4GDA9UHW6 222 aaKnown RBP10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 F8VP50 259 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 H0YGN5 161 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 HSF2BPO75031 334 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 URI1O94763 535 aaPredicted RBP10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 MTA2O94776 668 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 CXCL14O95715 111 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 FTCDO95954 541 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 CTSAP10619 480 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 RPL17P18621 184 aaKnown RBP10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 GPD1P21695 349 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 CYP2F1P24903 491 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 KLRC2P26717 231 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 SDC4P31431 198 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 SCNN1AP37088 669 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 DNA2P51530 1060 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 MAMLD1Q13495 774 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 TUBB2AQ13885 445 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 TCEAL1Q15170 157 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 RPS6KA1Q15418 735 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 CCDC181Q5TID7 509 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 RASIP1Q5U651 963 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 PLPP4Q5VZY2 271 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 PDE12Q6L8Q7 609 aaKnown RBP10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 RNF19BQ6ZMZ0 732 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 SND1Q7KZF4 910 aaKnown RBP eCLIP10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 TAS1R1Q7RTX1 841 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 TMEM110Q86TL2 294 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 SCUBE3Q8IX30 993 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 WDTC1Q8N5D0 677 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 OLIG1Q8TAK6 271 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 ATRIPQ8WXE1 791 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 PPP2R3CQ969Q6 453 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 C8orf48Q96LL4 319 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 SMOQ99835 787 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 TUBB2BQ9BVA1 445 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 RHOBTB2Q9BYZ6 727 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 ZBP1Q9H171 429 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 CYP4F11Q9HBI6 524 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 NGRNQ9NPE2 291 aaKnown RBP10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 TMLHEQ9NVH6 421 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 FNIP2Q9P278 1114 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 AFF4Q9UHB7 1163 aaKnown RBP10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 DPP7Q9UHL4 492 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 CYTH4Q9UIA0 394 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 MAFFQ9ULX9 164 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 USTQ9Y2C2 406 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 PCDHGC5Q9Y5F6 944 aa10.79□□□□□ -0.68
PRPF38A-202ENST00000474048 PLXNA4Q9HCM2 1894 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 PTPRDP23468 1912 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 GRID2IPA4D2P6 1211 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 TULP2O00295 520 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 BUB1BO60566 1050 aaPredicted RBP10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 ZBED1O96006 694 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 LRG1P02750 347 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 GLI1P08151 1106 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 PDGFRAP16234 1089 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 TCP1P17987 556 aaKnown RBP10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 GJC1P36383 396 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 SLC5A3P53794 718 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 EPHB3P54753 998 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 GPM6BQ13491 265 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 CLUL1Q15846 466 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 CCDC142Q17RM4 750 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 CCDC149Q6ZUS6 474 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 SLC26A9Q7LBE3 791 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 ITIH5Q86UX2 942 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 LRRTM3Q86VH5 581 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 RNF168Q8IYW5 571 aaPredicted RBP10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 TDHQ8IZJ6 230 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 NUP93Q8N1F7 819 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 ATAD1Q8NBU5 361 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 ZNF461Q8TAF7 563 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 RNF139Q8WU17 664 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 POF1BQ8WVV4 589 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 IRGQQ8WZA9 623 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 MCRS1Q96EZ8 462 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 CEP295NLQ96MC4 621 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 SLITRK1Q96PX8 696 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 KCNK16Q96T55 309 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 PKMYT1Q99640 499 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 C17orf80Q9BSJ5 609 aa10.78□□□□□ -0.68
PRPF38A-202ENST00000474048 IRX2Q9BZI1 471 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms