RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CFAP97Q9P2B7 532 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 PLXND1Q9Y4D7 1925 aa13.49□□□□□ -0.25
TRAF4-209ENST00000473421 A0A0A0MRY4 1105 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 TCRBV21S2A2A0A5A6 115 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 F8VP50 259 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 MAP3K13O43283 966 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 CFIP05156 583 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 GRIK1P39086 918 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 WASP42768 502 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 PGFP49763 221 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 SLC7A9P82251 487 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 MRPS21P82921 87 aaKnown RBP13.48□□□□□ -0.25
TRAF4-209ENST00000473421 CYP27A1Q02318 531 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 SF3A1Q15459 793 aaKnown RBP13.48□□□□□ -0.25
TRAF4-209ENST00000473421 LY6G5CQ5SRR4 150 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 L1TD1Q5T7N2 865 aaKnown RBP13.48□□□□□ -0.25
TRAF4-209ENST00000473421 SLC23A3Q6PIS1 610 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 NT5DC4Q86YG4 428 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 NAT16Q8N8M0 369 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 KRI1Q8N9T8 703 aaKnown RBP13.48□□□□□ -0.25
TRAF4-209ENST00000473421 FSIP1Q8NA03 581 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 HPS3Q969F9 1004 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 FUBP3Q96I24 572 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAF4-209ENST00000473421 TMX3Q96JJ7 454 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 ZFRQ96KR1 1074 aaKnown RBP13.48□□□□□ -0.25
TRAF4-209ENST00000473421 SPATA17Q96L03 361 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 PNKPQ96T60 521 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 MRPL45Q9BRJ2 306 aaKnown RBP13.48□□□□□ -0.25
TRAF4-209ENST00000473421 TTLL2Q9BWV7 592 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 GTPBP2Q9BX10 602 aaKnown RBP13.48□□□□□ -0.25
TRAF4-209ENST00000473421 DPEP3Q9H4B8 488 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 MRPL44Q9H9J2 332 aaKnown RBP13.48□□□□□ -0.25
TRAF4-209ENST00000473421 MAGEC2Q9UBF1 373 aaPredicted RBP13.48□□□□□ -0.25
TRAF4-209ENST00000473421 ITGA11Q9UKX5 1188 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 MSRB2Q9Y3D2 182 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 NEUROG3Q9Y4Z2 214 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 CLIC4Q9Y696 253 aa13.48□□□□□ -0.25
TRAF4-209ENST00000473421 A0A087X0B3 334 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 TMEM8BA6NDV4 472 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 CLDN5O00501 218 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 SLC26A4O43511 780 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 PRPF6O94906 941 aaKnown RBP13.47□□□□□ -0.25
TRAF4-209ENST00000473421 ABL1P00519 1130 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 OAS1P00973 400 aaKnown RBP13.47□□□□□ -0.25
TRAF4-209ENST00000473421 CST3P01034 146 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-209ENST00000473421 CD59P13987 128 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 GABRG2P18507 467 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 PCSK1P29120 753 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 LHX1P48742 406 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 RBP5P82980 135 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 TAF10Q12962 218 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 ACAP1Q15027 740 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 POSTNQ15063 836 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 PEAR1Q5VY43 1037 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-209ENST00000473421 C19orf48Q6RUI8 117 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 DENND5BQ6ZUT9 1274 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 CBWD2Q8IUF1 395 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 SLC41A1Q8IVJ1 513 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 RASSF8Q8NHQ8 419 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 SPATA18Q8TC71 538 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 WHAMMQ8TF30 809 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 EXOC4Q96A65 974 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 ELMO3Q96BJ8 720 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 HPDLQ96IR7 371 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 CLIC6Q96NY7 704 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 ACCSQ96QU6 501 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 ACOX2Q99424 681 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 NUSAP1Q9BXS6 441 aaKnown RBP13.47□□□□□ -0.25
TRAF4-209ENST00000473421 SLC6A17Q9H1V8 727 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 CAPN10Q9HC96 672 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 CD248Q9HCU0 757 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 ARHGEF4Q9NR80 690 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 INTS13Q9NVM9 706 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 TRPM5Q9NZQ8 1165 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 BCCIPQ9P287 314 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRAF4-209ENST00000473421 BPTFQ12830 3046 aa13.47□□□□□ -0.25
TRAF4-209ENST00000473421 ANKRD11Q6UB99 2663 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-209ENST00000473421 H3BQV1 296 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 GCNT3O95395 438 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 HOXD13P35453 343 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 LONP1P36776 959 aaKnown RBP13.46□□□□□ -0.25
TRAF4-209ENST00000473421 IFRD2Q12894 506 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-209ENST00000473421 LMAN2Q12907 356 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 RESTQ13127 1097 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 MDH1BQ5I0G3 518 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 LYSMD4Q5XG99 296 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 VSTM1Q6UX27 236 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 C11orf74Q86VG3 221 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 TMEM25Q86YD3 366 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 ETFBKMTQ8IXQ9 262 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 PGBD3Q8N328 593 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 PNPLA1Q8N8W4 532 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 CACTINQ8WUQ7 758 aaKnown RBP13.46□□□□□ -0.25
TRAF4-209ENST00000473421 HVCN1Q96D96 273 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 P2RY11Q96G91 374 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 PANK2Q9BZ23 570 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 ZNF518BQ9C0D4 1074 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 CDH9Q9ULB4 789 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 ADAMTS20P59510 1910 aa13.46□□□□□ -0.25
TRAF4-209ENST00000473421 PLXNB3Q9ULL4 1909 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms