RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 ISCUQ9H1K1 167 aa13.23□□□□□ -0.29
TRAPPC12-217ENST00000473348 LRRC4Q9HBW1 653 aa13.23□□□□□ -0.29
TRAPPC12-217ENST00000473348 CYLDQ9NQC7 956 aa13.23□□□□□ -0.29
TRAPPC12-217ENST00000473348 ADAM22Q9P0K1 906 aa13.23□□□□□ -0.29
TRAPPC12-217ENST00000473348 TJP2Q9UDY2 1190 aa13.23□□□□□ -0.29
TRAPPC12-217ENST00000473348 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRAPPC12-217ENST00000473348 BRWD1Q9NSI6 2320 aa13.23□□□□□ -0.29
TRAPPC12-217ENST00000473348 NUP210Q8TEM1 1887 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC12-217ENST00000473348 GABBR2O75899 941 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 FTLP02792 175 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 ERBB2P04626 1255 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 CALB1P05937 261 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 LCP1P13796 627 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 GTF2F1P35269 517 aaKnown RBP eCLIP13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 MAGEA1P43355 309 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 ACADSBP45954 432 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 ALDH1A3P47895 512 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 RPL34P49207 117 aaKnown RBP13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 TKTL1P51854 596 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 SLC5A3P53794 718 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 SNX16P57768 344 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 C1QBPQ07021 282 aaKnown RBP13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 HYAL1Q12794 435 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 IFRD2Q12894 506 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 PTP4A2Q12974 167 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 PLD1Q13393 1074 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 VEPH1Q14D04 833 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 C2CD6Q53TS8 623 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 HABP4Q5JVS0 413 aaKnown RBP13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 PPM1LQ5SGD2 360 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 ELMSAN1Q6PJG2 1045 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 SIX6OS1Q8N1H7 587 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 GIPC2Q8TF65 315 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 ZNF653Q96CK0 615 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 SPATA17Q96L03 361 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 CEP295NLQ96MC4 621 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 GAS2L1Q99501 681 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 PACSIN1Q9BY11 444 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 PLEKHA4Q9H4M7 779 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 IGFLR1Q9H665 355 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 LUC7LQ9NQ29 371 aaKnown RBP13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 DPP7Q9UHL4 492 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 REXO2Q9Y3B8 237 aaKnown RBP13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 MTCH2Q9Y6C9 303 aa13.22□□□□□ -0.29
TRAPPC12-217ENST00000473348 NCANO14594 1321 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 CDH23Q9H251 3354 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 SLC38A8A6NNN8 435 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 TNFRSF10BO14763 440 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 ATMINO43313 823 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 ZMYND10O75800 440 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 LRG1P02750 347 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 H2AFZP0C0S5 128 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 POU3F3P20264 500 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 ABCB4P21439 1286 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 IGFBP4P22692 258 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 EPHB3P54753 998 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 GALCP54803 685 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 KRT83P78385 493 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 RBM10P98175 930 aaKnown RBP13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 ADGRE1Q14246 886 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 RAB41Q5JT25 222 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 C10orf76Q5T2E6 689 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 DENND5BQ6ZUT9 1274 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 FAM183BPQ6ZVS7 135 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 H2AFVQ71UI9 128 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 RTL10Q7L3V2 364 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 TMEM110Q86TL2 294 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 MCOLN2Q8IZK6 566 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 NUP93Q8N1F7 819 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 VN1R2Q8NFZ6 395 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 HDAC7Q8WUI4 952 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 C18orf8Q96DM3 657 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 TRIM44Q96DX7 344 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 TRIM11Q96F44 468 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 ULBP1Q9BZM6 244 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 MIS12Q9H081 205 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 STRIP2Q9ULQ0 834 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 PCDHA13Q9Y5I0 950 aa13.21□□□□□ -0.29
TRAPPC12-217ENST00000473348 ANKRD62A6NC57 917 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 PAPSS1O43252 624 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 RFPL2O75678 378 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 RTN3O95197 1032 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 GLP2RO95838 553 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 CCDC175P0C221 793 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 CSH1P0DML2 217 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 CSH2P0DML3 217 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 MYBL1P10243 752 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 RRM1P23921 792 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 HOXA9P31269 272 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 DEKP35659 375 aaKnown RBP13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 GABRB2P47870 512 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 VAV2P52735 878 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 USP46P62068 366 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 MTMR3Q13615 1198 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 KCNC3Q14003 757 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 OR6B2Q6IFH4 312 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 GPR153Q6NV75 609 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 Q7L0L9 218 aa13.2□□□□□ -0.3
TRAPPC12-217ENST00000473348 PHLDB2Q86SQ0 1253 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms