RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 ZBTB16Q05516 673 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 ZC3H18Q86VM9 953 aaKnown RBP22.06■■□□□ 1.12
COL18A1-207ENST00000473212 LMNTD2Q8IXW0 634 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 TTC17Q96AE7 1141 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 FAM111AQ96PZ2 611 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 CAMKK2Q96RR4 588 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 PPP1R16BQ96T49 567 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 TMEM120AQ9BXJ8 343 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 PHACTR1Q9C0D0 580 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 YIPF3Q9GZM5 350 aa22.06■■□□□ 1.12
COL18A1-207ENST00000473212 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.06■■□□□ 1.12
COL18A1-207ENST00000473212 GSC2O15499 205 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 LMNAP02545 664 aaKnown RBP22.05■■□□□ 1.12
COL18A1-207ENST00000473212 PRKCBP05771 671 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 EIF4BP23588 611 aaKnown RBP22.05■■□□□ 1.12
COL18A1-207ENST00000473212 LAMTOR4Q0VGL1 99 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 PTK7Q13308 1070 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 SGSM1Q2NKQ1 1148 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 TSNAXIP1Q2TAA8 658 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 ANGEL2Q5VTE6 544 aaKnown RBP22.05■■□□□ 1.12
COL18A1-207ENST00000473212 TTC13Q8NBP0 860 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 CNKSR2Q8WXI2 1034 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 NSL1Q96IY1 281 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 PIWIL1Q96J94 861 aaKnown RBP22.05■■□□□ 1.12
COL18A1-207ENST00000473212 CALN1Q9BXU9 219 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 CPSF3Q9UKF6 684 aaKnown RBP22.05■■□□□ 1.12
COL18A1-207ENST00000473212 DPPA5A6NC42 116 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 CXCL8P10145 99 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 ELK3P41970 407 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 MUM1Q2TAK8 710 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 TREML2Q5T2D2 321 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 RFX6Q8HWS3 928 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 ARMC2Q8NEN0 867 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 PEBP4Q96S96 227 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 CYTH2Q99418 400 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 MRPL4Q9BYD3 311 aaKnown RBP22.05■■□□□ 1.12
COL18A1-207ENST00000473212 AS3MTQ9HBK9 375 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 EFR3BQ9Y2G0 817 aa22.05■■□□□ 1.12
COL18A1-207ENST00000473212 GYG2O15488 501 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 FAM155BO75949 473 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 ARIH2O95376 493 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 KRT7P08729 469 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 BGNP21810 368 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 CDH5P33151 784 aaPredicted RBP22.04■■□□□ 1.12
COL18A1-207ENST00000473212 FAAP100Q0VG06 881 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 CCDC6Q16204 474 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 SMYD3Q9H7B4 428 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 OGTO15294 1046 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 MAFO75444 373 aaPredicted RBP22.04■■□□□ 1.12
COL18A1-207ENST00000473212 ACADSP16219 412 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 MIPP30301 263 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 EIF3EP60228 445 aaKnown RBP22.04■■□□□ 1.12
COL18A1-207ENST00000473212 CDK16Q00536 496 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 KPNB1Q14974 876 aaKnown RBP22.04■■□□□ 1.12
COL18A1-207ENST00000473212 RCN1Q15293 331 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 HADHQ16836 314 aaKnown RBP22.04■■□□□ 1.12
COL18A1-207ENST00000473212 RINLQ6ZS11 566 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 SKA1Q96BD8 255 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 NLRP4Q96MN2 994 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 MINDY3Q9H8M7 445 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 NMRK1Q9NWW6 199 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 PCDHGC3Q9UN70 934 aa22.04■■□□□ 1.12
COL18A1-207ENST00000473212 SIGLEC16A6NMB1 481 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 ETV4P43268 484 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 HSDL1Q3SXM5 330 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 KBTBD12Q3ZCT8 623 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 CMPK2Q5EBM0 449 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 ZPBP2Q6X784 338 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 TTC7BQ86TV6 843 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 XYLT1Q86Y38 959 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 KCTD6Q8NC69 237 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 BTBD7Q9P203 1132 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 STOML1Q9UBI4 398 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 SIX4Q9UIU6 781 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 ZNF112Q9UJU3 913 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 IKBKGQ9Y6K9 419 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 IQANK1A0A1B0GTG1 560 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 TCRBV9S1A1TA0A576 114 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 SOWAHBA6NEL2 793 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 GRAP2O75791 330 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 KRT36O76013 467 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 DHRS4L1P0CG22 281 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 PYGBP11216 843 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 ICAM3P32942 547 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 TUBP50607 506 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 NEK3P51956 506 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 DPYSL3Q14195 570 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 PRKD1Q15139 912 aaPredicted RBP22.03■■□□□ 1.12
COL18A1-207ENST00000473212 ACSBG2Q5FVE4 666 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 APOPT1Q96IL0 206 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 FRMD8P1Q9BZ68 369 aaPredicted RBP22.03■■□□□ 1.12
COL18A1-207ENST00000473212 SYNCQ9H7C4 482 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 STRIP2Q9ULQ0 834 aa22.03■■□□□ 1.12
COL18A1-207ENST00000473212 MTO1Q9Y2Z2 717 aaKnown RBP22.03■■□□□ 1.12
COL18A1-207ENST00000473212 ZBTB42B2RXF5 422 aa22.02■■□□□ 1.12
COL18A1-207ENST00000473212 KBTBD13C9JR72 458 aa22.02■■□□□ 1.12
COL18A1-207ENST00000473212 NVLO15381 856 aaKnown RBP22.02■■□□□ 1.12
COL18A1-207ENST00000473212 NFICP08651 508 aa22.02■■□□□ 1.12
COL18A1-207ENST00000473212 DLDP09622 509 aaKnown RBP22.02■■□□□ 1.12
COL18A1-207ENST00000473212 RBP3P10745 1247 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms