RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 DDX25Q9UHL0 483 aaKnown RBP13.64□□□□□ -0.23
UBR4-210ENST00000466969 VAV3Q9UKW4 847 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 ARHGAP26Q9UNA1 814 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 PCDHB1Q9Y5F3 818 aa13.64□□□□□ -0.23
UBR4-210ENST00000466969 SLC9A3R1O14745 358 aaPredicted RBP13.63□□□□□ -0.23
UBR4-210ENST00000466969 USO1O60763 962 aaKnown RBP13.63□□□□□ -0.23
UBR4-210ENST00000466969 MT-CO3P00414 261 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 EDN1P05305 212 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 HAPLN1P10915 354 aaPredicted RBP13.63□□□□□ -0.23
UBR4-210ENST00000466969 ADH5P11766 374 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 HDCP19113 662 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 TYMPP19971 482 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 ABCB4P21439 1286 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 OXTRP30559 389 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 ATP2C1P98194 919 aaPredicted RBP13.63□□□□□ -0.23
UBR4-210ENST00000466969 NCAPH2Q6IBW4 605 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 APOA5Q6Q788 366 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 ADAT2Q7Z6V5 191 aaKnown RBP13.63□□□□□ -0.23
UBR4-210ENST00000466969 METTL3Q86U44 580 aaKnown RBP13.63□□□□□ -0.23
UBR4-210ENST00000466969 FSIP1Q8NA03 581 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 DEPTORQ8TB45 409 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 LRRC2Q9BYS8 371 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 EPN3Q9H201 632 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 ANKEF1Q9NU02 776 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 ABI2Q9NYB9 513 aaPredicted RBP13.63□□□□□ -0.23
UBR4-210ENST00000466969 PCDHB6Q9Y5E3 794 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 CSMD1Q96PZ7 3565 aa13.63□□□□□ -0.23
UBR4-210ENST00000466969 A0A1B0GTQ1 180 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 ZBTB43O43298 467 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 TADA3O75528 432 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 ITGB2P05107 769 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 LSSP48449 732 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 PDE6CP51160 858 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 SMARCB1Q12824 385 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 NCAPHQ15003 741 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 BTBD8Q5XKL5 378 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 USP53Q70EK8 1073 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 MIB1Q86YT6 1006 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 EID2Q8N6I1 236 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 CCDC148Q8NFR7 591 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 SPATA20Q8TB22 786 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 LRRC15Q8TF66 581 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 CCDC113Q9H0I3 377 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 SLC25A18Q9H1K4 315 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 RPF1Q9H9Y2 349 aaKnown RBP13.62□□□□□ -0.23
UBR4-210ENST00000466969 POLR1BQ9H9Y6 1135 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 CD248Q9HCU0 757 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 ITM2CQ9NQX7 267 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 TMPRSS4Q9NRS4 437 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 WDR70Q9NW82 654 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 USP36Q9P275 1121 aaKnown RBP13.62□□□□□ -0.23
UBR4-210ENST00000466969 RAD54BQ9Y620 910 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 PHLPP2Q6ZVD8 1323 aa13.62□□□□□ -0.23
UBR4-210ENST00000466969 LEFTY2O00292 366 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 ODC1P11926 461 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 RARRES1P49788 294 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 E2F1Q01094 437 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 EGFLAMQ63HQ2 1017 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 RHBDF2Q6PJF5 856 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 MOXD1Q6UVY6 613 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 PHTF2Q8N3S3 785 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 STKLD1Q8NE28 680 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 OR10T2Q8NGX3 314 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 FAM20AQ96MK3 541 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 CCNL2Q96S94 520 aaPredicted RBP13.61□□□□□ -0.23
UBR4-210ENST00000466969 ZCWPW1Q9H0M4 648 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 TM9SF3Q9HD45 589 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.61□□□□□ -0.23
UBR4-210ENST00000466969 GCNT4Q9P109 453 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 DEC1Q9P2X7 70 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 TUBGCP4Q9UGJ1 667 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 STARD13Q9Y3M8 1113 aa13.61□□□□□ -0.23
UBR4-210ENST00000466969 GOLGA8AA7E2F4 631 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 GOLGA8BA8MQT2 603 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 USP12O75317 370 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 CKMT2P17540 419 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 CTSKP43235 329 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 AARSP49588 968 aaKnown RBP eCLIP13.6□□□□□ -0.23
UBR4-210ENST00000466969 C21orf59P57076 290 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 NLRP5P59047 1200 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 GAD2Q05329 585 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 ST3GAL1Q11201 340 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 ORC1Q13415 861 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 ZNF568Q3ZCX4 644 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 NT5DC1Q5TFE4 455 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 LAYNQ6UX15 382 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 DHX32Q7L7V1 743 aaKnown RBP13.6□□□□□ -0.23
UBR4-210ENST00000466969 TICAM1Q8IUC6 712 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 NAT16Q8N8M0 369 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 TERB1Q8NA31 727 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 MCPH1Q8NEM0 835 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 ACOX2Q99424 681 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 GABRG3Q99928 467 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 NUP58Q9BVL2 599 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 CDT1Q9H211 546 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 OSGEPQ9NPF4 335 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 ASCL3Q9NQ33 180 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 TNFSF13BQ9Y275 285 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 MYOFQ9NZM1 2061 aa13.6□□□□□ -0.23
UBR4-210ENST00000466969 CITO14578 2027 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms