RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 BMPR2Q13873 1038 aa4.33□□□□□ -1.72
CCDC58-203ENST00000466854 E2F2Q14209 437 aa4.33□□□□□ -1.72
CCDC58-203ENST00000466854 GRM3Q14832 879 aa4.33□□□□□ -1.72
CCDC58-203ENST00000466854 SLC44A4Q53GD3 710 aa4.33□□□□□ -1.72
CCDC58-203ENST00000466854 RNF220Q5VTB9 566 aa4.33□□□□□ -1.72
CCDC58-203ENST00000466854 RGS7BPQ6MZT1 257 aaPredicted RBP4.33□□□□□ -1.72
CCDC58-203ENST00000466854 DARS2Q6PI48 645 aaKnown RBP4.33□□□□□ -1.72
CCDC58-203ENST00000466854 ZNF551Q7Z340 670 aaPredicted RBP4.33□□□□□ -1.72
CCDC58-203ENST00000466854 FAM156AQ8NDB6 213 aa4.33□□□□□ -1.72
CCDC58-203ENST00000466854 IL31RAQ8NI17 732 aa4.33□□□□□ -1.72
CCDC58-203ENST00000466854 TTC8Q8TAM2 541 aa4.33□□□□□ -1.72
CCDC58-203ENST00000466854 KBTBD7Q8WVZ9 684 aa4.33□□□□□ -1.72
CCDC58-203ENST00000466854 SECISBP2LQ93073 1101 aaKnown RBP4.33□□□□□ -1.72
CCDC58-203ENST00000466854 PTDSS2Q9BVG9 487 aa4.33□□□□□ -1.72
CCDC58-203ENST00000466854 TRIM54Q9BYV2 358 aa4.33□□□□□ -1.72
CCDC58-203ENST00000466854 ATP6V0A4Q9HBG4 840 aa4.33□□□□□ -1.72
CCDC58-203ENST00000466854 CPNE7Q9UBL6 633 aa4.33□□□□□ -1.72
CCDC58-203ENST00000466854 ZNF608Q9ULD9 1512 aaPredicted RBP4.32□□□□□ -1.72
CCDC58-203ENST00000466854 A6NNZ2 444 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 HMGB1P1B2RPK0 211 aaPredicted RBP4.32□□□□□ -1.72
CCDC58-203ENST00000466854 TMEM233B4DJY2 109 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 TISP43B9A030 160 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 MGEA5O60502 916 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 RASSF9O75901 435 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 XRCC6P12956 609 aaKnown RBP eCLIP4.32□□□□□ -1.72
CCDC58-203ENST00000466854 EPHB2P29323 1055 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 VIPR2P41587 438 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 ALDH9A1P49189 494 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 CACNB3P54284 484 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 PRKAG1P54619 331 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 SP2Q02086 613 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 MAPK7Q13164 816 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 MGAT5BQ3V5L5 792 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 PLAC9Q5JTB6 97 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 SWSAP1Q6NVH7 229 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 NEK8Q86SG6 692 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 ZNF280BQ86YH2 543 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 CCDC146Q8IYE0 955 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 KIAA0319LQ8IZA0 1049 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 SDR16C5Q8N3Y7 309 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 PNISRQ8TF01 805 aaKnown RBP4.32□□□□□ -1.72
CCDC58-203ENST00000466854 RPS6KC1Q96S38 1066 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 SENP7Q9BQF6 1050 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 ARHGEF3Q9NR81 526 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 OBP2AQ9NY56 170 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 NRBP1Q9UHY1 535 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 OGDHLQ9ULD0 1010 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 NDRG4Q9ULP0 352 aaKnown RBP4.32□□□□□ -1.72
CCDC58-203ENST00000466854 L1RE1Q9UN81 338 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 BTBD3Q9Y2F9 522 aa4.32□□□□□ -1.72
CCDC58-203ENST00000466854 FANCD2Q9BXW9 1451 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 H0YIZ8 118 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 CCER2I3L3R5 266 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 TBX3O15119 743 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 NXPH3O95157 252 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 CYP2C9P11712 490 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 KELP23276 732 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 MPGP29372 298 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 LRPAP1P30533 357 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 CLCN2P51788 898 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 ETFDHQ16134 617 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 PLA1AQ53H76 456 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 TREML2Q5T2D2 321 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 DEPDC1Q5TB30 811 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 CEP85Q6P2H3 762 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 APOA5Q6Q788 366 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 MAVSQ7Z434 540 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 SRGAP1Q7Z6B7 1085 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 SLC15A3Q8IY34 581 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 XAGE5Q8WWM1 108 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 ATRIPQ8WXE1 791 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 LRTOMTQ8WZ04 291 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 SUCLG2Q96I99 432 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 ZNF48Q96MX3 618 aaPredicted RBP4.31□□□□□ -1.72
CCDC58-203ENST00000466854 STK31Q9BXU1 1019 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 C22orf23Q9BZE7 217 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 SEMA4CQ9C0C4 833 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 LRRC27Q9C0I9 530 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 ZNF287Q9HBT7 754 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 PRDM11Q9NQV5 511 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 SH3BP4Q9P0V3 963 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 TBC1D30Q9Y2I9 924 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 COMMD10Q9Y6G5 202 aa4.31□□□□□ -1.72
CCDC58-203ENST00000466854 QSOX1O00391 747 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 TPP1O14773 563 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 SLC16A3O15427 465 aaKnown RBP4.3□□□□□ -1.72
CCDC58-203ENST00000466854 TLR5O60602 858 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 JTBO76095 146 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 FAM163BP0C2L3 166 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 EN2P19622 333 aaPredicted RBP4.3□□□□□ -1.72
CCDC58-203ENST00000466854 LIPAP38571 399 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 MYO1EQ12965 1108 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 CNGA2Q16280 664 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 SUPT20HL1Q3ZLR7 823 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 C3orf38Q5JPI3 329 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 CEP78Q5JTW2 689 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 ZNF618Q5T7W0 954 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 TEDDM1Q5T9Z0 273 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 DCAF12L1Q5VU92 463 aa4.3□□□□□ -1.72
CCDC58-203ENST00000466854 MORN5Q5VZ52 161 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms