RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 SHOX2O60902 331 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-205ENST00000466192 CABYRO75952 493 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 IVDP26440 423 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 ADCY8P40145 1251 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 BCAT1P54687 386 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 SLC6A3Q01959 620 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 ZSCAN26Q16670 478 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 C15orf59Q2T9L4 293 aaPredicted RBP19.15■□□□□ 0.66
COL9A3-205ENST00000466192 KRT71Q3SY84 523 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 UBAP2Q5T6F2 1119 aaKnown RBP19.15■□□□□ 0.66
COL9A3-205ENST00000466192 DENND2CQ68D51 928 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 B3GALNT2Q8NCR0 500 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 PXYLP1Q8TE99 480 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 TRAIPQ9BWF2 469 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 USP18Q9UMW8 372 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 NEU2Q9Y3R4 380 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 ZNF623O75123 536 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 TRUB2O95900 331 aaKnown RBP19.15■□□□□ 0.66
COL9A3-205ENST00000466192 KDELR1P24390 212 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 TKTP29401 623 aaKnown RBP19.15■□□□□ 0.66
COL9A3-205ENST00000466192 SLC29A2Q14542 456 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 FAM26DQ5JW98 314 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 ZNF365Q70YC5 407 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 GSTA5Q7RTV2 222 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 C3orf58Q8NDZ4 430 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 TNIP3Q96KP6 325 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 SENP8Q96LD8 212 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 PEBP4Q96S96 227 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 DNPEPQ9ULA0 475 aa19.15■□□□□ 0.66
COL9A3-205ENST00000466192 GABRDO14764 452 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 LIASO43766 372 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 CD48P09326 243 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 ATF2P15336 505 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 ITIH2P19823 946 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 IBSPP21815 317 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-205ENST00000466192 ACAT1P24752 427 aaKnown RBP19.14■□□□□ 0.65
COL9A3-205ENST00000466192 HPDP32754 393 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-205ENST00000466192 PCK1P35558 622 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 SKOR1P84550 965 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 CCDC14Q49A88 953 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 CYP4V2Q6ZWL3 525 aaPredicted RBP19.14■□□□□ 0.65
COL9A3-205ENST00000466192 PRUNE1Q86TP1 453 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 RNF169Q8NCN4 708 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 CLEC4CQ8WTT0 213 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 HAUS1Q96CS2 278 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 CFAP57Q96MR6 1250 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 PAAF1Q9BRP4 392 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 FAM129AQ9BZQ8 928 aa19.14■□□□□ 0.65
COL9A3-205ENST00000466192 A0A0U1RQF3 1178 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 NUDT17P0C025 328 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 RPL34P49207 117 aaKnown RBP19.13■□□□□ 0.65
COL9A3-205ENST00000466192 APLP1P51693 650 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 ITGA8P53708 1063 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 EIF3BP55884 814 aaKnown RBP19.13■□□□□ 0.65
COL9A3-205ENST00000466192 GNGT1P63211 74 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 SLMAPQ14BN4 828 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 TAZQ16635 292 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 CDO1Q16878 200 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 LRRC31Q6UY01 552 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 KDM7AQ6ZMT4 941 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 CMASQ8NFW8 434 aaPredicted RBP19.13■□□□□ 0.65
COL9A3-205ENST00000466192 GLT1D1Q96MS3 346 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 ADAM2Q99965 735 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 CASTOR2A6NHX0 329 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 INHAP05111 366 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 RARGP13631 454 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 RAB27AP51159 221 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 IRAK1P51617 712 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 BYSLQ13895 437 aaKnown RBP19.13■□□□□ 0.65
COL9A3-205ENST00000466192 KIAA0319Q5VV43 1072 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 LHX8Q68G74 356 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 FUKQ8N0W3 1084 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 UHMK1Q8TAS1 419 aaKnown RBP19.13■□□□□ 0.65
COL9A3-205ENST00000466192 HSPH1Q92598 858 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 DNAI2Q9GZS0 605 aa19.13■□□□□ 0.65
COL9A3-205ENST00000466192 DPYSL4O14531 572 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 PTPN1P18031 435 aaKnown RBP19.12■□□□□ 0.65
COL9A3-205ENST00000466192 HNRNPH2P55795 449 aaKnown RBP19.12■□□□□ 0.65
COL9A3-205ENST00000466192 SNX16P57768 344 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 ATP11AP98196 1134 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 DRICH1Q6PGQ1 229 aaPredicted RBP19.12■□□□□ 0.65
COL9A3-205ENST00000466192 ZDHHC17Q8IUH5 632 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 CCDC89Q8N998 374 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 HNRNPABQ99729 332 aaKnown RBP19.12■□□□□ 0.65
COL9A3-205ENST00000466192 TRPV6Q9H1D0 765 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 RSAD1Q9HA92 442 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 ZNF148Q9UQR1 794 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 EFR3BQ9Y2G0 817 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 TSC2P49815 1807 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 MOXD2PA6NHM9 499 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 CLDN5O00501 218 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 POMCP01189 267 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 FAM163BP0C2L3 166 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 LCP1P13796 627 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 CHKAP35790 457 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 CDR1P51861 262 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 PPARDQ03181 441 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 UPP1Q16831 310 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 RHBDF2Q6PJF5 856 aa19.12■□□□□ 0.65
COL9A3-205ENST00000466192 PAQR9Q6ZVX9 377 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms