RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 MYL6P60660 151 aa24.24■■□□□ 1.47
USP42-205ENST00000465073 FILIP1Q7Z7B0 1213 aa24.24■■□□□ 1.47
USP42-205ENST00000465073 B3GALNT2Q8NCR0 500 aa24.24■■□□□ 1.47
USP42-205ENST00000465073 TSTD1Q8NFU3 115 aa24.24■■□□□ 1.47
USP42-205ENST00000465073 B3GNT5Q9BYG0 378 aa24.24■■□□□ 1.47
USP42-205ENST00000465073 ZNF518BQ9C0D4 1074 aa24.24■■□□□ 1.47
USP42-205ENST00000465073 GZF1Q9H116 711 aaPredicted RBP24.24■■□□□ 1.47
USP42-205ENST00000465073 XYLT2Q9H1B5 865 aa24.24■■□□□ 1.47
USP42-205ENST00000465073 RXFP3Q9NSD7 469 aa24.24■■□□□ 1.47
USP42-205ENST00000465073 NXF1Q9UBU9 619 aaKnown RBP24.24■■□□□ 1.47
USP42-205ENST00000465073 CPQQ9Y646 472 aa24.24■■□□□ 1.47
USP42-205ENST00000465073 CNOT1A5YKK6 2376 aaKnown RBP24.23■■□□□ 1.47
USP42-205ENST00000465073 PHACTR2O75167 634 aa24.23■■□□□ 1.47
USP42-205ENST00000465073 DGKEP52429 567 aa24.23■■□□□ 1.47
USP42-205ENST00000465073 CACNA2D1P54289 1103 aa24.23■■□□□ 1.47
USP42-205ENST00000465073 KNOP1Q1ED39 458 aaKnown RBP24.23■■□□□ 1.47
USP42-205ENST00000465073 GAB4Q2WGN9 574 aa24.23■■□□□ 1.47
USP42-205ENST00000465073 STPG1Q5TH74 334 aa24.23■■□□□ 1.47
USP42-205ENST00000465073 DDX42Q86XP3 938 aaKnown RBP eCLIP24.23■■□□□ 1.47
USP42-205ENST00000465073 BLZF1Q9H2G9 400 aa24.23■■□□□ 1.47
USP42-205ENST00000465073 SLC39A2Q9NP94 309 aa24.23■■□□□ 1.47
USP42-205ENST00000465073 TMEM30AQ9NV96 361 aa24.23■■□□□ 1.47
USP42-205ENST00000465073 FAM13BQ9NYF5 915 aa24.23■■□□□ 1.47
USP42-205ENST00000465073 CACNA1BQ00975 2339 aa24.23■■□□□ 1.47
USP42-205ENST00000465073 CLDN5O00501 218 aa24.22■■□□□ 1.47
USP42-205ENST00000465073 DCLK1O15075 740 aa24.22■■□□□ 1.47
USP42-205ENST00000465073 EXOC3O60645 756 aa24.22■■□□□ 1.47
USP42-205ENST00000465073 CYP17A1P05093 508 aa24.22■■□□□ 1.47
USP42-205ENST00000465073 CASP1P29466 404 aa24.22■■□□□ 1.47
USP42-205ENST00000465073 DHCR24Q15392 516 aa24.22■■□□□ 1.47
USP42-205ENST00000465073 USP39Q53GS9 565 aaKnown RBP24.22■■□□□ 1.47
USP42-205ENST00000465073 C2orf27AQ580R0 203 aa24.22■■□□□ 1.47
USP42-205ENST00000465073 C11orf74Q86VG3 221 aa24.22■■□□□ 1.47
USP42-205ENST00000465073 NUP93Q8N1F7 819 aa24.22■■□□□ 1.47
USP42-205ENST00000465073 PDZD8Q8NEN9 1154 aa24.22■■□□□ 1.47
USP42-205ENST00000465073 GOLGA5Q8TBA6 731 aa24.22■■□□□ 1.47
USP42-205ENST00000465073 VRTNQ9H8Y1 702 aa24.22■■□□□ 1.47
USP42-205ENST00000465073 SMPD4Q9NXE4 827 aa24.22■■□□□ 1.47
USP42-205ENST00000465073 PTPRDP23468 1912 aa24.21■■□□□ 1.47
USP42-205ENST00000465073 RTN3O95197 1032 aaPredicted RBP24.21■■□□□ 1.47
USP42-205ENST00000465073 YWHAQP27348 245 aa24.21■■□□□ 1.47
USP42-205ENST00000465073 AP3M2P53677 418 aa24.21■■□□□ 1.47
USP42-205ENST00000465073 SEC13P55735 322 aa24.21■■□□□ 1.47
USP42-205ENST00000465073 FOXD4L5Q5VV16 416 aaPredicted RBP24.21■■□□□ 1.47
USP42-205ENST00000465073 FOXD4L4Q8WXT5 416 aaPredicted RBP24.21■■□□□ 1.47
USP42-205ENST00000465073 OVCA2Q8WZ82 227 aa24.21■■□□□ 1.47
USP42-205ENST00000465073 SMOC1Q9H4F8 434 aa24.21■■□□□ 1.47
USP42-205ENST00000465073 CFAP97Q9P2B7 532 aa24.21■■□□□ 1.47
USP42-205ENST00000465073 MMP17Q9ULZ9 603 aa24.21■■□□□ 1.47
USP42-205ENST00000465073 ATP8B3O60423 1300 aa24.21■■□□□ 1.47
USP42-205ENST00000465073 KCNA4P22459 653 aa24.2■■□□□ 1.47
USP42-205ENST00000465073 ME1P48163 572 aa24.2■■□□□ 1.47
USP42-205ENST00000465073 MRPS21P82921 87 aaKnown RBP24.2■■□□□ 1.47
USP42-205ENST00000465073 SNX21Q969T3 373 aa24.2■■□□□ 1.47
USP42-205ENST00000465073 TBC1D14Q9P2M4 693 aa24.2■■□□□ 1.47
USP42-205ENST00000465073 PCDHA7Q9UN72 937 aa24.2■■□□□ 1.47
USP42-205ENST00000465073 HELZP42694 1942 aaKnown RBP24.2■■□□□ 1.46
USP42-205ENST00000465073 BCLAF3A2AJT9 711 aaKnown RBP24.19■■□□□ 1.46
USP42-205ENST00000465073 ADH1CP00326 375 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 ZSCAN22P10073 491 aaPredicted RBP24.19■■□□□ 1.46
USP42-205ENST00000465073 MBL2P11226 248 aaPredicted RBP24.19■■□□□ 1.46
USP42-205ENST00000465073 GBP1P32455 592 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 EIF2DP41214 584 aaKnown RBP24.19■■□□□ 1.46
USP42-205ENST00000465073 AFMP43652 599 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 CLDN10P78369 228 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 CREB5Q02930 508 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 IFRD2Q12894 506 aaPredicted RBP24.19■■□□□ 1.46
USP42-205ENST00000465073 BIRC3Q13489 604 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 CUL4BQ13620 913 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 RESP18Q5W5W9 173 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 ATL3Q6DD88 541 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 RASSF3Q86WH2 238 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 FBXO32Q969P5 355 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 TNIP3Q96KP6 325 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 CNOT6LQ96LI5 555 aaKnown RBP24.19■■□□□ 1.46
USP42-205ENST00000465073 PNKPQ96T60 521 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 EML5Q05BV3 1969 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 E2F8A0AVK6 867 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 CAVIN2O95810 425 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 CASP4P49662 377 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 ZNF699Q32M78 642 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 FOXD4L6Q3SYB3 417 aaPredicted RBP24.19■■□□□ 1.46
USP42-205ENST00000465073 ZNF667Q5HYK9 610 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 RHBDF2Q6PJF5 856 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 FOXD4L3Q6VB84 417 aaPredicted RBP24.19■■□□□ 1.46
USP42-205ENST00000465073 CEP57L1Q8IYX8 460 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 CCDC33Q8N5R6 958 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 PLEKHO2Q8TD55 490 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 PARD3BQ8TEW8 1205 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 SMYD3Q9H7B4 428 aa24.19■■□□□ 1.46
USP42-205ENST00000465073 CHD8Q9HCK8 2581 aa24.18■■□□□ 1.46
USP42-205ENST00000465073 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.18■■□□□ 1.46
USP42-205ENST00000465073 SLC6A11P48066 632 aa24.18■■□□□ 1.46
USP42-205ENST00000465073 CDH8P55286 799 aa24.18■■□□□ 1.46
USP42-205ENST00000465073 CRY1Q16526 586 aa24.18■■□□□ 1.46
USP42-205ENST00000465073 HSF5Q4G112 596 aaPredicted RBP24.18■■□□□ 1.46
USP42-205ENST00000465073 RNF43Q68DV7 783 aa24.18■■□□□ 1.46
USP42-205ENST00000465073 ANO7Q6IWH7 933 aa24.18■■□□□ 1.46
USP42-205ENST00000465073 KCNK16Q96T55 309 aa24.18■■□□□ 1.46
USP42-205ENST00000465073 MED10Q9BTT4 135 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms