RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 MYBL1P10243 752 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 ATF6P18850 670 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 RRM1P23921 792 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 GRIK1P39086 918 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 TUFMP49411 452 aaKnown RBP15.12■□□□□ 0.01
COL6A1-202ENST00000463060 GPR15P49685 360 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 CLCN4P51793 760 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 SLC8A3P57103 927 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 PPP1R15BQ5SWA1 713 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 PM20D1Q6GTS8 502 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 LLGL2Q6P1M3 1020 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 MICAL1Q8TDZ2 1067 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 TRIM11Q96F44 468 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 LUC7LQ9NQ29 371 aaKnown RBP15.12■□□□□ 0.01
COL6A1-202ENST00000463060 FBXW11Q9UKB1 542 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 PLXNA3P51805 1871 aa15.12■□□□□ 0.01
COL6A1-202ENST00000463060 A0A0A6YYK5 440 aaPredicted RBP15.11■□□□□ 0.01
COL6A1-202ENST00000463060 USP27XA6NNY8 438 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 TRIM66O15016 1216 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 SOAT2O75908 522 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 MTA2O94776 668 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 ABCB4P21439 1286 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 KLRC2P26717 231 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 SCNN1AP37088 669 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 HADHBP55084 474 aaKnown RBP15.11■□□□□ 0.01
COL6A1-202ENST00000463060 RPL10AP62906 217 aaKnown RBP15.11■□□□□ 0.01
COL6A1-202ENST00000463060 CYP4A22Q5TCH4 519 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 OLFML1Q6UWY5 402 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 BHLHA9Q7RTU4 235 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 ADGRD2Q7Z7M1 963 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 SCN4BQ8IWT1 228 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 SCUBE3Q8IX30 993 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 C3orf20Q8ND61 904 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 MRPL38Q96DV4 380 aaKnown RBP15.11■□□□□ 0.01
COL6A1-202ENST00000463060 TTYH1Q9H313 450 aaPredicted RBP15.11■□□□□ 0.01
COL6A1-202ENST00000463060 WDR35Q9P2L0 1181 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 CNOT8Q9UFF9 292 aaKnown RBP15.11■□□□□ 0.01
COL6A1-202ENST00000463060 STRIP2Q9ULQ0 834 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 GREB1Q4ZG55 1949 aa15.11■□□□□ 0.01
COL6A1-202ENST00000463060 MTCL1Q9Y4B5 1905 aaKnown RBP15.11■□□□□ 0.01
COL6A1-202ENST00000463060 TRIOBPQ9H2D6 2365 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 SIGLEC16A6NMB1 481 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 ZSCAN12O43309 604 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 PAPLNO95428 1278 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 SPATA31D3P0C874 917 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 TKTL1P51854 596 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 SNX16P57768 344 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 KIF5AQ12840 1032 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 MAMLD1Q13495 774 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 KCNC3Q14003 757 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 MGAT5BQ3V5L5 792 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 LIN9Q5TKA1 542 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 SDHAF4Q5VUM1 108 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 SPATA31D4Q6ZUB0 917 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 FAM183BPQ6ZVS7 135 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 RTL10Q7L3V2 364 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 KIAA1328Q86T90 577 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 ZSCAN30Q86W11 494 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 ZDHHC17Q8IUH5 632 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 NUP93Q8N1F7 819 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 KREMEN2Q8NCW0 462 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 MSANTD4Q8NCY6 345 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 SCAMP5Q8TAC9 235 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 SLC35G2Q8TBE7 412 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 HDAC7Q8WUI4 952 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 CTNNBL1Q8WYA6 563 aaPredicted RBP15.1■□□□□ 0.01
COL6A1-202ENST00000463060 ZNF653Q96CK0 615 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 TTLL2Q9BWV7 592 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 MIS12Q9H081 205 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 CYP4F11Q9HBI6 524 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 ST7Q9NRC1 585 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 COMMD8Q9NX08 183 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 TRMT1Q9NXH9 659 aaKnown RBP15.1■□□□□ 0.01
COL6A1-202ENST00000463060 TRIM10Q9UDY6 481 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 CHORDC1Q9UHD1 332 aaPredicted RBP15.1■□□□□ 0.01
COL6A1-202ENST00000463060 TMEM59LQ9UK28 342 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 COG5Q9UP83 839 aa15.1■□□□□ 0.01
COL6A1-202ENST00000463060 COL4A4P53420 1690 aaPredicted RBP15.09■□□□□ 0.01
COL6A1-202ENST00000463060 TMEM191CA6NGB0 347 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 PIK3R2O00459 728 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 SOX1O00570 391 aaPredicted RBP15.09■□□□□ 0.01
COL6A1-202ENST00000463060 ATMINO43313 823 aaPredicted RBP15.09■□□□□ 0.01
COL6A1-202ENST00000463060 FBXO21O94952 628 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 GLUD1P00367 558 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 LCP1P13796 627 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 HMGA1P17096 107 aaKnown RBP15.09■□□□□ 0.01
COL6A1-202ENST00000463060 POU3F3P20264 500 aaPredicted RBP15.09■□□□□ 0.01
COL6A1-202ENST00000463060 ELF1P32519 619 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 SLC5A3P53794 718 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 DAOAP59103 153 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 USP46P62068 366 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 SLC6A3Q01959 620 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 ADIGQ0VDE8 80 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 DUSP6Q16828 381 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 ARCQ7LC44 396 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 PHLDB2Q86SQ0 1253 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 C17orf53Q8N3J3 647 aaPredicted RBP15.09■□□□□ 0.01
COL6A1-202ENST00000463060 TXLNBQ8N3L3 684 aa15.09■□□□□ 0.01
COL6A1-202ENST00000463060 IPO4Q8TEX9 1081 aaKnown RBP15.09■□□□□ 0.01
COL6A1-202ENST00000463060 CLEC4CQ8WTT0 213 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms