RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 KIR2DL1P43626 348 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-227ENST00000458564 SEC13P55735 322 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 CYP27A1Q02318 531 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 LMAN2Q12907 356 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 RESTQ13127 1097 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 CUL4AQ13619 759 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 PEAR1Q5VY43 1037 aaPredicted RBP11.12□□□□□ -0.63
HDLBP-227ENST00000458564 TMEM92Q6UXU6 159 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 STXBP4Q6ZWJ1 553 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 DDX42Q86XP3 938 aaKnown RBP eCLIP11.12□□□□□ -0.63
HDLBP-227ENST00000458564 CCDC65Q8IXS2 484 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 WHAMMQ8TF30 809 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 SPACA7Q96KW9 195 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 PNKPQ96T60 521 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 ELOVL4Q9GZR5 314 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 RNF38Q9H0F5 515 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 TMEM30AQ9NV96 361 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 HSPBP1Q9NZL4 362 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 INVSQ9Y283 1065 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 ATRXP46100 2492 aa11.12□□□□□ -0.63
HDLBP-227ENST00000458564 PKD1L2Q7Z442 2459 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 DMXL2Q8TDJ6 3036 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 E2F8A0AVK6 867 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 ANTXRLA6NF34 631 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-227ENST00000458564 C1QTNF9BB2RNN3 333 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 SGK1O00141 431 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 EIF3DO15371 548 aaKnown RBP eCLIP11.11□□□□□ -0.63
HDLBP-227ENST00000458564 KAT7O95251 611 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 STAU1O95793 577 aaKnown RBP11.11□□□□□ -0.63
HDLBP-227ENST00000458564 APODP05090 189 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 PDGFRBP09619 1106 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 C1QTNF9P0C862 333 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 HOXD13P35453 343 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 GRIA2P42262 883 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 DHPSP49366 369 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-227ENST00000458564 IRX4P78413 519 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 MESP2Q0VG99 397 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 TAF10Q12962 218 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 MDH1BQ5I0G3 518 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 EOGTQ5NDL2 527 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 RHBDF2Q6PJF5 856 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 LPCAT2Q7L5N7 544 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 TRAPPC11Q7Z392 1133 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 C12orf40Q86WS4 652 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 SYT12Q8IV01 421 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 SFTPA1Q8IWL2 248 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 PHTF2Q8N3S3 785 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 CCDC33Q8N5R6 958 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 ALLCQ8N6M5 410 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 TXNDC5Q8NBS9 432 aaKnown RBP11.11□□□□□ -0.63
HDLBP-227ENST00000458564 KCNV2Q8TDN2 545 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 NOC3LQ8WTT2 800 aaKnown RBP11.11□□□□□ -0.63
HDLBP-227ENST00000458564 OVCA2Q8WZ82 227 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 OTUB2Q96DC9 234 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 SLITRK1Q96PX8 696 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 FNBP1Q96RU3 617 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 MMS19Q96T76 1030 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 ADAM33Q9BZ11 813 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 TNMDQ9H2S6 317 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 UPF2Q9HAU5 1272 aaKnown RBP11.11□□□□□ -0.63
HDLBP-227ENST00000458564 POLMQ9NP87 494 aaPredicted RBP11.11□□□□□ -0.63
HDLBP-227ENST00000458564 SMPD4Q9NXE4 827 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 CFAP97Q9P2B7 532 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 TBC1D14Q9P2M4 693 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 NME7Q9Y5B8 376 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 PLXND1Q9Y4D7 1925 aa11.11□□□□□ -0.63
HDLBP-227ENST00000458564 ASCC3Q8N3C0 2202 aaKnown RBP11.11□□□□□ -0.63
HDLBP-227ENST00000458564 CACNA1EQ15878 2313 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 THADAQ6YHU6 1953 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 UPK3BL1B0FP48 263 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 UPK3BL2E5RIL1 263 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 TULP1O00294 542 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-227ENST00000458564 HOXC11O43248 304 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-227ENST00000458564 ADAM23O75077 832 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 KLF8O95600 359 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-227ENST00000458564 ADH5P11766 374 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 PTPN1P18031 435 aaKnown RBP11.1□□□□□ -0.63
HDLBP-227ENST00000458564 GNL1P36915 607 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-227ENST00000458564 TNFRSF4P43489 277 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 TUBP50607 506 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 CACNA2D1P54289 1103 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 FOXC1Q12948 553 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 BYSLQ13895 437 aaKnown RBP11.1□□□□□ -0.63
HDLBP-227ENST00000458564 PSMD6Q15008 389 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 SLC39A14Q15043 492 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 SNRNP35Q16560 246 aaKnown RBP11.1□□□□□ -0.63
HDLBP-227ENST00000458564 MAP7D1Q3KQU3 841 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 TRIM61Q5EBN2 209 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 SNX30Q5VWJ9 437 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 TDRD10Q5VZ19 366 aaKnown RBP11.1□□□□□ -0.63
HDLBP-227ENST00000458564 CNNM4Q6P4Q7 775 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 SLC23A3Q6PIS1 610 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 EPM2AIP1Q7L775 607 aaPredicted RBP11.1□□□□□ -0.63
HDLBP-227ENST00000458564 ETFBKMTQ8IXQ9 262 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 B3GALNT2Q8NCR0 500 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 GLIS3Q8NEA6 775 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 PDZD8Q8NEN9 1154 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 PIGKQ92643 395 aa11.1□□□□□ -0.63
HDLBP-227ENST00000458564 GATA6Q92908 595 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms