RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 RPL22P35268 128 aaKnown RBP17.45■□□□□ 0.38
CCDC43-202ENST00000457422 HIF1AQ16665 826 aa17.45■□□□□ 0.38
CCDC43-202ENST00000457422 C15orf59Q2T9L4 293 aaPredicted RBP17.45■□□□□ 0.38
CCDC43-202ENST00000457422 HP1BP3Q5SSJ5 553 aaPredicted RBP17.45■□□□□ 0.38
CCDC43-202ENST00000457422 RNF187Q5TA31 235 aaPredicted RBP17.45■□□□□ 0.38
CCDC43-202ENST00000457422 ARHGAP17Q68EM7 881 aa17.45■□□□□ 0.38
CCDC43-202ENST00000457422 PMF1Q6P1K2 205 aa17.45■□□□□ 0.38
CCDC43-202ENST00000457422 ACOT1Q86TX2 421 aa17.45■□□□□ 0.38
CCDC43-202ENST00000457422 VSIG1Q86XK7 387 aa17.45■□□□□ 0.38
CCDC43-202ENST00000457422 MGARPQ8TDB4 240 aa17.45■□□□□ 0.38
CCDC43-202ENST00000457422 STK32AQ8WU08 396 aa17.45■□□□□ 0.38
CCDC43-202ENST00000457422 KAT2BQ92831 832 aa17.45■□□□□ 0.38
CCDC43-202ENST00000457422 CALN1Q9BXU9 219 aa17.45■□□□□ 0.38
CCDC43-202ENST00000457422 TBK1Q9UHD2 729 aa17.45■□□□□ 0.38
CCDC43-202ENST00000457422 E7ESA3 106 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 CYP2C9P11712 490 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 CDH6P55285 790 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 EIF3EP60228 445 aaKnown RBP17.44■□□□□ 0.38
CCDC43-202ENST00000457422 PDIA2Q13087 525 aaKnown RBP17.44■□□□□ 0.38
CCDC43-202ENST00000457422 DPYSL3Q14195 570 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 NOMO1Q15155 1222 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 FAM47CQ5HY64 1035 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 UNC45BQ8IWX7 931 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 ZBED8Q8IZ13 594 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 SLC35F5Q8WV83 523 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 CKAP2Q8WWK9 683 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 OSBPL7Q9BZF2 842 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 NXF3Q9H4D5 531 aaKnown RBP17.44■□□□□ 0.38
CCDC43-202ENST00000457422 ACTR5Q9H9F9 607 aaPredicted RBP17.44■□□□□ 0.38
CCDC43-202ENST00000457422 UBN1Q9NPG3 1134 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.44■□□□□ 0.38
CCDC43-202ENST00000457422 FAM49BQ9NUQ9 324 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 RNF19AQ9NV58 838 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 PRPSAP2O60256 369 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 RBP3P10745 1247 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 ARL4CP56559 192 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 SNX16P57768 344 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 ADAM17P78536 824 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 SLC6A3Q01959 620 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 MMRN1Q13201 1228 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 MPP2Q14168 576 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 TFDP2Q14188 446 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 HIC1Q14526 733 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 LRRC14Q15048 493 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 PDK2Q15119 407 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 GPR162Q16538 588 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 CDO1Q16878 200 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 CCDC14Q49A88 953 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 LACTB2Q53H82 288 aaPredicted RBP17.44■□□□□ 0.38
CCDC43-202ENST00000457422 C9orf57Q5W0N0 161 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 ZDHHC17Q8IUH5 632 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 CCDC13Q8IYE1 715 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 ANKS4BQ8N8V4 417 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 TEKT4Q8WW24 435 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 DYDC1Q8WWB3 177 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 NCAPGQ9BPX3 1015 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 KCNK9Q9NPC2 374 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 SAMD15Q9P1V8 674 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 FETUBQ9UGM5 382 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 CPA4Q9UI42 421 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 GJD2Q9UKL4 321 aa17.44■□□□□ 0.38
CCDC43-202ENST00000457422 UBQLN1Q9UMX0 589 aaKnown RBP17.44■□□□□ 0.38
CCDC43-202ENST00000457422 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.43■□□□□ 0.38
CCDC43-202ENST00000457422 GOLGA8MH3BSY2 632 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 RECQL4O94761 1208 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 VIMP08670 466 aaKnown RBP17.43■□□□□ 0.38
CCDC43-202ENST00000457422 STIP1P31948 543 aaKnown RBP17.43■□□□□ 0.38
CCDC43-202ENST00000457422 ACTN3Q08043 901 aaPredicted RBP17.43■□□□□ 0.38
CCDC43-202ENST00000457422 TMED2Q15363 201 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 BOLA3Q53S33 107 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 MORN1Q5T089 497 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 ANKRD22Q5VYY1 191 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 ARHGEF18Q6ZSZ5 1173 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 TRABD2AQ86V40 505 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 SESTD1Q86VW0 696 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 SRRM1Q8IYB3 904 aaKnown RBP17.43■□□□□ 0.38
CCDC43-202ENST00000457422 ANKRD42Q8N9B4 389 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 SPATA18Q8TC71 538 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 TSPAN18Q96SJ8 248 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 TBCBQ99426 244 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 APOL6Q9BWW8 343 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 MAK16Q9BXY0 300 aaKnown RBP17.43■□□□□ 0.38
CCDC43-202ENST00000457422 HESX1Q9UBX0 185 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 SLC24A2Q9UI40 661 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 ZMYND8Q9ULU4 1186 aaPredicted RBP17.43■□□□□ 0.38
CCDC43-202ENST00000457422 GOLGA6L7A0A1B0GV03 622 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 RASA4BC9J798 803 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 RASA4O43374 803 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 BANF1O75531 89 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 CELF2O95319 508 aaKnown RBP17.43■□□□□ 0.38
CCDC43-202ENST00000457422 GAD2Q05329 585 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 MFSD10Q14728 455 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 TTC31Q49AM3 519 aaPredicted RBP17.43■□□□□ 0.38
CCDC43-202ENST00000457422 OLFML2BQ68BL8 750 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 PPP1R21Q6ZMI0 780 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 CAPN12Q6ZSI9 719 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 MAP7D3Q8IWC1 876 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 C2orf69Q8N8R5 385 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 CCT6BQ92526 530 aa17.43■□□□□ 0.38
CCDC43-202ENST00000457422 KHSRPQ92945 711 aaKnown RBP eCLIP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms