RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 MPLKIPQ8TAP9 179 aa2.81□□□□□ -1.96
LINC02540-201ENST00000455554 MRPL46Q9H2W6 279 aaKnown RBP2.81□□□□□ -1.96
LINC02540-201ENST00000455554 TRMT13Q9NUP7 481 aaKnown RBP2.81□□□□□ -1.96
LINC02540-201ENST00000455554 SLC5A4Q9NY91 659 aa2.81□□□□□ -1.96
LINC02540-201ENST00000455554 FEZ2Q9UHY8 353 aaPredicted RBP2.81□□□□□ -1.96
LINC02540-201ENST00000455554 PCDHA3Q9Y5H8 950 aa2.81□□□□□ -1.96
LINC02540-201ENST00000455554 AP4M1O00189 453 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 SLC28A2O43868 658 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 MARCH6O60337 910 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 GAS8-AS1O95177 125 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 MT-CO1P00395 513 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 PHKG2P15735 406 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 PDE6CP51160 858 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 ANAPC15P60006 121 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 ZXDBP98169 803 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 ODF1Q14990 250 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 UAP1L1Q3KQV9 507 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 DEPDC1Q5TB30 811 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 DDX42Q86XP3 938 aaKnown RBP eCLIP2.8□□□□□ -1.96
LINC02540-201ENST00000455554 LIX1LQ8IVB5 337 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 SFTPA1Q8IWL2 248 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 OSCP1Q8WVF1 389 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 IGFBPL1Q8WX77 278 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 NR4A3Q92570 626 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 MOGAT1Q96PD6 335 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 PUS7LQ9H0K6 701 aaKnown RBP2.8□□□□□ -1.96
LINC02540-201ENST00000455554 ZBTB40Q9NUA8 1239 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 AMFRQ9UKV5 643 aa2.8□□□□□ -1.96
LINC02540-201ENST00000455554 XPOTO43592 962 aaKnown RBP2.79□□□□□ -1.96
LINC02540-201ENST00000455554 MT-CO3P00414 261 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 FGAP02671 866 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 AHSGP02765 367 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 ASIC2Q16515 512 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 AMOTQ4VCS5 1084 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 AWAT1Q58HT5 328 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 TMTC4Q5T4D3 741 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 DPY19L3Q6ZPD9 716 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 CAND1Q86VP6 1230 aaKnown RBP2.79□□□□□ -1.96
LINC02540-201ENST00000455554 MMP21Q8N119 569 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 SIRT6Q8N6T7 355 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 B4GALNT2Q8NHY0 566 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 ZCRB1Q8TBF4 217 aaKnown RBP2.79□□□□□ -1.96
LINC02540-201ENST00000455554 UBE2Q2Q8WVN8 375 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 TEKT5Q96M29 485 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 PRR25Q96S07 402 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 TMEM204Q9BSN7 226 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 CCDC8Q9H0W5 538 aaPredicted RBP2.79□□□□□ -1.96
LINC02540-201ENST00000455554 MRPL44Q9H9J2 332 aaKnown RBP2.79□□□□□ -1.96
LINC02540-201ENST00000455554 ABCF2Q9UG63 623 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 SHOC2Q9UQ13 582 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 NOP58Q9Y2X3 529 aaKnown RBP2.79□□□□□ -1.96
LINC02540-201ENST00000455554 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.79□□□□□ -1.96
LINC02540-201ENST00000455554 COL4A3BPQ9Y5P4 624 aa2.79□□□□□ -1.96
LINC02540-201ENST00000455554 hCG_1984214I3L0E3 225 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 CSF1RP07333 972 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 MYBL2P10244 700 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 PLA2G2AP14555 144 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 LRPAP1P30533 357 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 VIPR2P41587 438 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 PSG6Q00889 435 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 SATB1Q01826 763 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 NOGQ13253 232 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 MTX1Q13505 466 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 SEC23BQ15437 767 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 THEMIS2Q5TEJ8 643 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 GFI1BQ5VTD9 330 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 TMEM65Q6PI78 240 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 NOL8Q76FK4 1167 aaKnown RBP2.78□□□□□ -1.96
LINC02540-201ENST00000455554 HEATR3Q7Z4Q2 680 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 PPP1R3BQ86XI6 285 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 RFX6Q8HWS3 928 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 FOXP4Q8IVH2 680 aaPredicted RBP2.78□□□□□ -1.96
LINC02540-201ENST00000455554 IZUMO1Q8IYV9 350 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 PCSK9Q8NBP7 692 aaKnown RBP2.78□□□□□ -1.96
LINC02540-201ENST00000455554 WBP1Q96G27 269 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 ZNF479Q96JC4 524 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 FAM84BQ96KN1 310 aaPredicted RBP2.78□□□□□ -1.96
LINC02540-201ENST00000455554 MEIS3Q99687 375 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 BRINP2Q9C0B6 783 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 CXorf36Q9H7Y0 433 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 SPC25Q9HBM1 224 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 PCDH12Q9NPG4 1184 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 MCM8Q9UJA3 840 aa2.78□□□□□ -1.96
LINC02540-201ENST00000455554 MRPS17Q9Y2R5 130 aaKnown RBP2.78□□□□□ -1.96
LINC02540-201ENST00000455554 IGLV5-39A0A0G2JS06 123 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 IFITM10A6NMD0 228 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 PRSS47A8MTI9 375 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 CES2O00748 559 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 SLC16A6O15403 523 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 UNC5CO95185 931 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 VNN1O95497 513 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 NGFRP08138 427 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 TNFRSF1BP20333 461 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 ADORA2AP29274 412 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 HK3P52790 923 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 EXOSC9Q06265 439 aaKnown RBP2.77□□□□□ -1.97
LINC02540-201ENST00000455554 MYO1EQ12965 1108 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 LARS2Q15031 903 aaKnown RBP2.77□□□□□ -1.97
LINC02540-201ENST00000455554 LY6KQ17RY6 165 aa2.77□□□□□ -1.97
LINC02540-201ENST00000455554 ABCB5Q2M3G0 1257 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms