RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 AGO3Q9H9G7 860 aaKnown RBP18.3■□□□□ 0.52
SMC6-206ENST00000446852 DNAJC17Q9NVM6 304 aaKnown RBP18.3■□□□□ 0.52
SMC6-206ENST00000446852 DRG1Q9Y295 367 aaKnown RBP18.3■□□□□ 0.52
SMC6-206ENST00000446852 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 CAND2O75155 1236 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 TKTP29401 623 aaKnown RBP18.29■□□□□ 0.52
SMC6-206ENST00000446852 HPDP32754 393 aaPredicted RBP18.29■□□□□ 0.52
SMC6-206ENST00000446852 IRAK1P51617 712 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 BCAT1P54687 386 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 ATP11AP98196 1134 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 OTUD4Q01804 1114 aaKnown RBP18.29■□□□□ 0.52
SMC6-206ENST00000446852 BST2Q10589 180 aaKnown RBP18.29■□□□□ 0.52
SMC6-206ENST00000446852 KCNA10Q16322 511 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 LRRC31Q6UY01 552 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 SLC2A14Q8TDB8 520 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 LPPQ93052 612 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 ADAM7Q9H2U9 754 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 DPYSL4O14531 572 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 ALDH1A1P00352 501 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 ITGAVP06756 1048 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 PRKAR2AP13861 404 aaKnown RBP18.29■□□□□ 0.52
SMC6-206ENST00000446852 GAD1Q99259 594 aa18.29■□□□□ 0.52
SMC6-206ENST00000446852 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.29■□□□□ 0.52
SMC6-206ENST00000446852 AOC2O75106 756 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 ARSEP51690 589 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 GNGT1P63211 74 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 SKIDA1Q1XH10 827 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 CCSAPQ6IQ19 270 aaPredicted RBP18.28■□□□□ 0.52
SMC6-206ENST00000446852 HIBCHQ6NVY1 386 aaPredicted RBP18.28■□□□□ 0.52
SMC6-206ENST00000446852 LEKR1Q6ZMV7 388 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 TRMT10CQ7L0Y3 403 aaKnown RBP18.28■□□□□ 0.52
SMC6-206ENST00000446852 TOP6BLQ8N6T0 577 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 KLHDC9Q8NEP7 349 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 CALN1Q9BXU9 219 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 RNF186Q9NXI6 227 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 NOVA2Q9UNW9 492 aaKnown RBP18.28■□□□□ 0.52
SMC6-206ENST00000446852 TDRD15B5MCY1 1934 aaKnown RBP18.28■□□□□ 0.52
SMC6-206ENST00000446852 ATP2C2O75185 946 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 ENDOD1O94919 500 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 WARSP23381 471 aaKnown RBP18.28■□□□□ 0.52
SMC6-206ENST00000446852 RPL34P49207 117 aaKnown RBP18.28■□□□□ 0.52
SMC6-206ENST00000446852 PLCB3Q01970 1234 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 MMRN1Q13201 1228 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 RPAINQ86UA6 219 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 TSPYL2Q9H2G4 693 aaPredicted RBP18.28■□□□□ 0.52
SMC6-206ENST00000446852 C10orf88Q9H8K7 445 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 NGRNQ9NPE2 291 aaKnown RBP18.28■□□□□ 0.52
SMC6-206ENST00000446852 MIOSQ9NXC5 875 aa18.28■□□□□ 0.52
SMC6-206ENST00000446852 PECAM1P16284 738 aaPredicted RBP18.27■□□□□ 0.52
SMC6-206ENST00000446852 TFE3P19532 575 aaPredicted RBP18.27■□□□□ 0.52
SMC6-206ENST00000446852 ZSCAN26Q16670 478 aa18.27■□□□□ 0.52
SMC6-206ENST00000446852 HOOK3Q86VS8 718 aa18.27■□□□□ 0.52
SMC6-206ENST00000446852 RFX6Q8HWS3 928 aa18.27■□□□□ 0.52
SMC6-206ENST00000446852 B3GALNT2Q8NCR0 500 aa18.27■□□□□ 0.52
SMC6-206ENST00000446852 BBOF1Q8ND07 529 aa18.27■□□□□ 0.52
SMC6-206ENST00000446852 FAM172AQ8WUF8 416 aa18.27■□□□□ 0.52
SMC6-206ENST00000446852 CHST12Q9NRB3 414 aa18.27■□□□□ 0.52
SMC6-206ENST00000446852 CYB561D2O14569 222 aa18.27■□□□□ 0.51
SMC6-206ENST00000446852 PRPSAP2O60256 369 aa18.27■□□□□ 0.51
SMC6-206ENST00000446852 ACSL3O95573 720 aa18.27■□□□□ 0.51
SMC6-206ENST00000446852 ACAT1P24752 427 aaKnown RBP18.27■□□□□ 0.51
SMC6-206ENST00000446852 SDC4P31431 198 aa18.27■□□□□ 0.51
SMC6-206ENST00000446852 THPOP40225 353 aa18.27■□□□□ 0.51
SMC6-206ENST00000446852 CDH6P55285 790 aa18.27■□□□□ 0.51
SMC6-206ENST00000446852 GUCY1A3Q02108 690 aa18.27■□□□□ 0.51
SMC6-206ENST00000446852 WSCD1Q658N2 575 aa18.27■□□□□ 0.51
SMC6-206ENST00000446852 ZDHHC17Q8IUH5 632 aa18.27■□□□□ 0.51
SMC6-206ENST00000446852 EPS8L3Q8TE67 593 aaKnown RBP18.27■□□□□ 0.51
SMC6-206ENST00000446852 TLCD1Q96CP7 247 aa18.27■□□□□ 0.51
SMC6-206ENST00000446852 TNIP3Q96KP6 325 aa18.27■□□□□ 0.51
SMC6-206ENST00000446852 ADAM33Q9BZ11 813 aa18.27■□□□□ 0.51
SMC6-206ENST00000446852 SMIM23A6NLE4 172 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 SGK1O00141 431 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 DNALI1O14645 258 aaPredicted RBP18.26■□□□□ 0.51
SMC6-206ENST00000446852 LCP1P13796 627 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 CDR1P51861 262 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 GDF10P55107 478 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 MAGOHP61326 146 aaKnown RBP18.26■□□□□ 0.51
SMC6-206ENST00000446852 GPS1Q13098 491 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 DPYSL3Q14195 570 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 PTGISQ16647 500 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 AGMOQ6ZNB7 445 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 FUKQ8N0W3 1084 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 CCHCR1Q8TD31 782 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 RSAD1Q9HA92 442 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 PRDM4Q9UKN5 801 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 TSC2P49815 1807 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 ARL5CA6NH57 179 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 EIF3HO15372 352 aaKnown RBP eCLIP18.26■□□□□ 0.512e-6■■■□□ 15.9
SMC6-206ENST00000446852 CD52P31358 61 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 SNX16P57768 344 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 SCYL2Q6P3W7 929 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 SLC26A9Q7LBE3 791 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 TTC13Q8NBP0 860 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 SMC1BQ8NDV3 1235 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 C3orf58Q8NDZ4 430 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 TMEM109Q9BVC6 243 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 TSPYL1Q9H0U9 437 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 PCDH9Q9HC56 1237 aa18.26■□□□□ 0.51
SMC6-206ENST00000446852 GPATCH2LQ9NWQ4 482 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms