RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 FAM227BQ96M60 508 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 JAKMIP1Q96N16 626 aaKnown RBP3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 AIFM3Q96NN9 605 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 NUP88Q99567 741 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 ARPC5LQ9BPX5 153 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 ISCA1Q9BUE6 129 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 SARGQ9BW04 601 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 ALDH8A1Q9H2A2 487 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 CASS4Q9NQ75 786 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 TMEM74BQ9NUR3 256 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 DKK2Q9UBU2 259 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 TLK1Q9UKI8 766 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 DNM3Q9UQ16 869 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 MRFAP1Q9Y605 127 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 CYP46A1Q9Y6A2 500 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 COL5A2P05997 1499 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 RGPD5Q99666 1765 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 SCN11AQ9UI33 1791 aa3.96□□□□□ -1.78
HMGB3P11-201ENST00000440127 PKD1L3Q7Z443 1732 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 COL4A3Q01955 1670 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 RFX7Q2KHR2 1363 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 ATRNL1Q5VV63 1379 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 A0A0D9SFI3 127 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 CCDC151A5D8V7 595 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 MYADML2A6NDP7 307 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 EYA2O00167 538 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 KIAA0355O15063 1070 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 CIAO1O76071 339 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 HAUS5O94927 633 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 STARD3NLO95772 234 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 MTHFD1P11586 935 aaKnown RBP3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 CKBP12277 381 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 CASTP20810 708 aaKnown RBP3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 CYP2C19P33261 490 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 ALDH1A3P47895 512 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 MTNR1BP49286 362 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 MRPS35P82673 323 aaKnown RBP3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 OCA2Q04671 838 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 GTF2H3Q13889 308 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 KRT32Q14532 448 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 GRM3Q14832 879 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 ANKRD1Q15327 319 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 ADCK5Q3MIX3 580 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 LONRF3Q496Y0 759 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 MCMDC2Q4G0Z9 681 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 PRR16Q569H4 304 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 CAVIN1Q6NZI2 390 aaKnown RBP3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 B3GNT9Q6UX72 402 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 KIF6Q6ZMV9 814 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 ATG9AQ7Z3C6 839 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 RD3Q7Z3Z2 195 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 RSPH3Q86UC2 560 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 GAS2L3Q86XJ1 694 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 CMIPQ8IY22 773 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 SLC44A3Q8N4M1 653 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 PJA1Q8NG27 643 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 ASB10Q8WXI3 467 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 PIGBQ92521 554 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 HOXB13Q92826 284 aaPredicted RBP3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 FUBP1Q96AE4 644 aaKnown RBP3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 NEUROD6Q96NK8 337 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 ADAM2Q99965 735 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 PRDM16Q9HAZ2 1276 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 MAN1C1Q9NR34 630 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 HELLSQ9NRZ9 838 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 ADARB2Q9NS39 739 aaKnown RBP3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 HMG20BQ9P0W2 317 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 DDX20Q9UHI6 824 aaKnown RBP3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 DBNLQ9UJU6 430 aaKnown RBP3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 SMC3Q9UQE7 1217 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 ATP6V1DQ9Y5K8 247 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 CRYBG1Q9Y4K1 1723 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 TNS2Q63HR2 1409 aa3.95□□□□□ -1.78
HMGB3P11-201ENST00000440127 C5P01031 1676 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 MED23Q9ULK4 1368 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 TRGV11A0A075B6L2 103 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 EXOC5O00471 708 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 STX6O43752 255 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 TAF5LO75529 589 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 PCCAP05165 728 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 OSMP13725 252 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 CPA1P15085 419 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 DDCP20711 480 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 AGXTP21549 392 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 SYT1P21579 422 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 FGFR4P22455 802 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 RPS6KB1P23443 525 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 CCND1P24385 295 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 GJB2P29033 226 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 WASP42768 502 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 GPR3P46089 330 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 TIMM10P62072 90 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 DHX8Q14562 1220 aaKnown RBP3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 CLUL1Q15846 466 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 ME3Q16798 604 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 CCDC142Q17RM4 750 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 CCDC57Q2TAC2 916 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 ZSCAN23Q3MJ62 389 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 HSP90AB3PQ58FF7 597 aa3.94□□□□□ -1.78
HMGB3P11-201ENST00000440127 CCDC158Q5M9N0 1113 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms