RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 AGBL1Q96MI9 1066 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 TUFT1Q9NNX1 390 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 RABGEF1Q9UJ41 708 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 COL4A1P02462 1669 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 PHRF1Q9P1Y6 1649 aaKnown RBP12.18□□□□□ -0.46
SMPD4-209ENST00000439886 TCRBV7S3A2A0A539 114 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 BOLA2-SMG1P6H3BVE0 249 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 SPTLC1O15269 473 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 GH2P01242 217 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 ITGA2BP08514 1039 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 VCLP18206 1134 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 PMLP29590 882 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 GRAPQ13588 217 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 MORF4L2Q15014 288 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 DNAL1Q4LDG9 190 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 USP37Q86T82 979 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 NDUFAF2Q8N183 169 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 GRAPLQ8TC17 118 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-209ENST00000439886 LZICQ8WZA0 190 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 VTI1AQ96AJ9 217 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 VPS11Q9H270 941 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 KMT5AQ9NQR1 393 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 PCDHAC2Q9Y5I4 1007 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 PLCH1Q4KWH8 1693 aa12.18□□□□□ -0.46
SMPD4-209ENST00000439886 A0A1B0GUL6 1792 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 DOCK2Q92608 1830 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 HTR3EA5X5Y0 456 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 KBTBD13C9JR72 458 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 TRAFD1O14545 582 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-209ENST00000439886 ALOX15BO15296 676 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 LYPLA1O75608 230 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-209ENST00000439886 STAMBPO95630 424 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 ABHD2P08910 425 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 ATG16L1Q676U5 607 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 PAOXQ6QHF9 649 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 DEFB107AQ8IZN7 70 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 BHMTQ93088 406 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 FAF2Q96CS3 445 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 ERLEC1Q96DZ1 483 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 MAGED2Q9UNF1 606 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-209ENST00000439886 APOBEC2Q9Y235 224 aaKnown RBP12.17□□□□□ -0.46
SMPD4-209ENST00000439886 EFR3BQ9Y2G0 817 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 DTNAQ9Y4J8 743 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 STRCQ7RTU9 1775 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 CYP3A7-CYP3A51PA0A087WV96 503 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 PIK3R2O00459 728 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 TOP3BO95985 862 aaKnown RBP12.17□□□□□ -0.46
SMPD4-209ENST00000439886 CYP3A7P24462 503 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 GDF10P55107 478 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 CEP55Q53EZ4 464 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 TRIM67Q6ZTA4 783 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 DHDDSQ86SQ9 333 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 TRIML2Q8N7C3 387 aa12.17□□□□□ -0.46
SMPD4-209ENST00000439886 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-209ENST00000439886 MRPL1Q9BYD6 325 aaKnown RBP12.17□□□□□ -0.46
SMPD4-209ENST00000439886 AIM2O14862 343 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 ZNF862O60290 1169 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 SNHG28P0DPA3 235 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 DSG3P32926 999 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 PDE1BQ01064 536 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 FOLH1Q04609 750 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 STX3Q13277 289 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 KRT72Q14CN4 511 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 ABCB5Q2M3G0 1257 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 SPOCD1Q6ZMY3 1216 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 HPS6Q86YV9 775 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 DEPTORQ8TB45 409 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 LRGUKQ96M69 825 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 RPL26L1Q9UNX3 145 aaKnown RBP12.16□□□□□ -0.46
SMPD4-209ENST00000439886 TM9SF1O15321 606 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 TM7SF2O76062 418 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 DLDP09622 509 aaKnown RBP12.16□□□□□ -0.46
SMPD4-209ENST00000439886 KLRC2P26717 231 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 C1orf228Q6PIY5 440 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 NET1Q7Z628 596 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-209ENST00000439886 RCOR2Q8IZ40 523 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 DAW1Q8N136 415 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 EXD1Q8NHP7 514 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 FEZF2Q8TBJ5 459 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 SLC39A3Q9BRY0 314 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 LIN28AQ9H9Z2 209 aaKnown RBP12.16□□□□□ -0.46
SMPD4-209ENST00000439886 EXOC7Q9UPT5 735 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 HEY1Q9Y5J3 304 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 CLUHO75153 1309 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 WDR64B1ANS9 1081 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 KRT37O76014 449 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 PSMA2P25787 234 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 VCPP55072 806 aaKnown RBP12.16□□□□□ -0.46
SMPD4-209ENST00000439886 RPL10AP62906 217 aaKnown RBP12.16□□□□□ -0.46
SMPD4-209ENST00000439886 CYLC2Q14093 348 aaPredicted RBP12.16□□□□□ -0.46
SMPD4-209ENST00000439886 PACS1Q6VY07 963 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 PPIL6Q8IXY8 311 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 ALLCQ8N6M5 410 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 BANPQ8N9N5 519 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 KCTD6Q8NC69 237 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 HELQQ8TDG4 1101 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 SLCO2A1Q92959 643 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 ATXN7L3BQ96GX2 97 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 WDR11Q9BZH6 1224 aa12.16□□□□□ -0.46
SMPD4-209ENST00000439886 SOX13Q9UN79 622 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms