RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 LYPLA1O75608 230 aaPredicted RBP12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 DHRS4L1P0CG22 281 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 RPL5P46777 297 aaKnown RBP12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 CNGA3Q16281 694 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 DOK7Q18PE1 504 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 TMEM259Q4ZIN3 620 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 DCAF8Q5TAQ9 597 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 MAP3K21Q5TCX8 1036 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 CES4AQ5XG92 561 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 TRIM42Q8IWZ5 723 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 CCDC17Q96LX7 622 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 CATSPER2Q96P56 530 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 TCEAL9Q9UHQ7 104 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 PRR12Q9ULL5 1215 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 DRG1Q9Y295 367 aaKnown RBP12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 PCDHAC2Q9Y5I4 1007 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 HEMK1Q9Y5R4 338 aaPredicted RBP12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 SCINQ9Y6U3 715 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 HNRNPDLO14979 420 aaKnown RBP12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 IL1R1P14778 569 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 MSX2P35548 267 aaPredicted RBP12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 MAGEA8P43361 318 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 RARRES1P49788 294 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 STX3Q13277 289 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 CCNIQ14094 377 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 GK3PQ14409 553 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 TLR1Q15399 786 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 XKR9Q5GH70 373 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 MROH9Q5TGP6 573 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 TRIM67Q6ZTA4 783 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 GALNT4Q8N4A0 578 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 ZFP28Q8NHY6 868 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 HSPBAP1Q96EW2 488 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 PTTG2Q9NZH5 202 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 DNAJB4Q9UDY4 337 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 BLOC1S6Q9UL45 172 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 hCG_1818297A0A087WSY0 165 aa12.02□□□□□ -0.48
HMGCS1-202ENST00000433297 DKC1O60832 514 aaKnown RBP eCLIP12.02□□□□□ -0.48
HMGCS1-202ENST00000433297 TFAP2AP05549 437 aa12.02□□□□□ -0.48
HMGCS1-202ENST00000433297 HNRNPDQ14103 355 aaKnown RBP12.02□□□□□ -0.48
HMGCS1-202ENST00000433297 POLNQ7Z5Q5 900 aa12.02□□□□□ -0.48
HMGCS1-202ENST00000433297 NDUFAF2Q8N183 169 aa12.02□□□□□ -0.48
HMGCS1-202ENST00000433297 NAT8LQ8N9F0 302 aa12.02□□□□□ -0.48
HMGCS1-202ENST00000433297 MRPL1Q9BYD6 325 aaKnown RBP12.02□□□□□ -0.48
HMGCS1-202ENST00000433297 USP29Q9HBJ7 922 aa12.02□□□□□ -0.48
HMGCS1-202ENST00000433297 NDUFA13Q9P0J0 144 aa12.02□□□□□ -0.48
HMGCS1-202ENST00000433297 PCSK1NQ9UHG2 260 aa12.02□□□□□ -0.48
HMGCS1-202ENST00000433297 FARP1Q9Y4F1 1045 aaPredicted RBP12.02□□□□□ -0.48
HMGCS1-202ENST00000433297 AK5Q9Y6K8 562 aa12.02□□□□□ -0.48
HMGCS1-202ENST00000433297 DDTLA6NHG4 134 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 UGT1A9O60656 530 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 ITGAVP06756 1048 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 ATP2B4P23634 1241 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 PCSK6P29122 969 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 COPAP53621 1224 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 NOMO3P69849 1222 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 CYP4A22Q5TCH4 519 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 FAXCQ5TGI0 409 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 DNAJC24Q6P3W2 148 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 AAGABQ6PD74 315 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 UGT2A3Q6UWM9 527 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 TMC7Q7Z402 723 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 SIAH1Q8IUQ4 282 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 UGT1A7Q9HAW7 530 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 UGT1A10Q9HAW8 530 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 UGT1A8Q9HAW9 530 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 ARHGEF38Q9NXL2 777 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 TBX20Q9UMR3 447 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 APOBEC2Q9Y235 224 aaKnown RBP12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 ZNF510Q9Y2H8 683 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 MAD1L1Q9Y6D9 718 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 KRT37O76014 449 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 HSPA1LP34931 641 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 GTF2BQ00403 316 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 C16orf46Q6P387 395 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 LRRC8BQ6P9F7 803 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 ANO5Q75V66 913 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 USP37Q86T82 979 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 METTL25Q8N6Q8 603 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 RAB3IL1Q8TBN0 382 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 PRICKLE1Q96MT3 831 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 DHRS4Q9BTZ2 278 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 LIN28AQ9H9Z2 209 aaKnown RBP12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 CNTN3Q9P232 1028 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 FAF1Q9UNN5 650 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 EXOC7Q9UPT5 735 aa12.02□□□□□ -0.49
HMGCS1-202ENST00000433297 CXorf49A8MYA2 514 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 NDC80O14777 642 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 SERPINA6P08185 405 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 FAM163BP0C2L3 166 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 CCDC166P0CW27 439 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 CDK4P11802 303 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 ECE1P42892 770 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 ALDH1A3P47895 512 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 CYTH1Q15438 398 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 MYLK3Q32MK0 819 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 HSP90AA5PQ58FG0 334 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 DUS1LQ6P1R4 473 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 TSHZ1Q6ZSZ6 1077 aa12.01□□□□□ -0.49
HMGCS1-202ENST00000433297 PTF1AQ7RTS3 328 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms