RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 RETP07949 1114 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 USP17L7P0C7H9 530 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 DLATP10515 647 aaKnown RBP10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TCF3P15923 654 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SDHBP21912 280 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 BDNFP23560 247 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CASP1P29466 404 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 HOXC13P31276 330 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CYP2J2P51589 502 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ARHGAP8P85298 464 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 GRSF1Q12849 480 aaKnown RBP eCLIP10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SRSF5Q13243 272 aaKnown RBP10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SIM2Q14190 667 aaPredicted RBP10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 LPAL2Q16609 132 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FOXD4L5Q5VV16 416 aaPredicted RBP10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 RESP18Q5W5W9 173 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ATL3Q6DD88 541 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CC2D1AQ6P1N0 951 aaPredicted RBP10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 HS2ST1Q7LGA3 356 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 WDR5BQ86VZ2 330 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SCN4BQ8IWT1 228 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 NELFCDQ8IXH7 590 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FSIP1Q8NA03 581 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MYCBPAPQ8TBZ2 947 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 OSCP1Q8WVF1 389 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FOXD4L4Q8WXT5 416 aaPredicted RBP10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PCED1BQ96HM7 432 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CYP2S1Q96SQ9 504 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MRPL45Q9BRJ2 306 aaKnown RBP10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TTLL2Q9BWV7 592 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 XYLT2Q9H1B5 865 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 BLZF1Q9H2G9 400 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TRPC7Q9HCX4 862 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CGNQ9P2M7 1197 aaKnown RBP10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MAGEC2Q9UBF1 373 aaPredicted RBP10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PCDHA7Q9UN72 937 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ARHGAP26Q9UNA1 814 aa10.05□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CCDC163A0A0D9SF12 145 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PVALEFA0A1B0GWK0 134 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CLIC2O15247 247 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 EGFP01133 1207 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PDGFRBP09619 1106 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FAM163BP0C2L3 166 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PFKLP17858 780 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TNNI1P19237 187 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 DRD1P21728 446 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 GJA4P35212 333 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ME1P48163 572 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 NOP14P78316 857 aaKnown RBP10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CLDN10P78369 228 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 AMPD2Q01433 879 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CYP27A1Q02318 531 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SPEM2Q0P670 501 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CUL4BQ13620 913 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PKP1Q13835 747 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 KCNB1Q14721 858 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 KNOP1Q1ED39 458 aaKnown RBP10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 EML3Q32P44 896 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FOXD4L6Q3SYB3 417 aaPredicted RBP10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 NAIF1Q69YI7 327 aaPredicted RBP10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 HEATR6Q6AI08 1181 aaKnown RBP10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FOXD4L3Q6VB84 417 aaPredicted RBP10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PRR23BQ6ZRT6 265 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 DENND5BQ6ZUT9 1274 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CPA6Q8N4T0 437 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ARL14EPQ8N8R7 260 aaPredicted RBP10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SH3RF2Q8TEC5 729 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TMEM174Q8WUU8 243 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 EZH1Q92800 747 aaPredicted RBP10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ATP2A3Q93084 1043 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CCDC127Q96BQ5 260 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 C8orf48Q96LL4 319 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FNBP1Q96RU3 617 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MMS19Q96T76 1030 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ECT2Q9H8V3 914 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 FBRSL1Q9HCM7 1045 aaKnown RBP10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 SLC39A2Q9NP94 309 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 TMEM30AQ9NV96 361 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 DUS2Q9NX74 493 aaKnown RBP10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 USP18Q9UMW8 372 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 WNT6Q9Y6F9 365 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 EPG5Q9HCE0 2579 aa10.04□□□□□ -0.8
CDC42-IT1-201ENST00000431803 HELZP42694 1942 aaKnown RBP10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ZNF840PA6NDX5 716 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 F8VP50 259 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 KLRC4O43908 158 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ATG13O75143 517 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 OLFM2O95897 454 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CCNYL3P0C7X3 344 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 HDCP19113 662 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ATICP31939 592 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 GNL1P36915 607 aaPredicted RBP10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 GRIK1P39086 918 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 PDE6CP51160 858 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 GALK1P51570 392 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ATXN1P54253 815 aaKnown RBP10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 CACNA2D1P54289 1103 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 MYL6P60660 151 aa10.03□□□□□ -0.8
CDC42-IT1-201ENST00000431803 ZXDBP98169 803 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms