RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 USP13Q92995 863 aaPredicted RBP18.45■□□□□ 0.54
CTSD-203ENST00000429746 TUBGCP2Q9BSJ2 902 aa18.45■□□□□ 0.54
CTSD-203ENST00000429746 ZFP14Q9HCL3 533 aa18.45■□□□□ 0.54
CTSD-203ENST00000429746 ANO10Q9NW15 660 aa18.45■□□□□ 0.54
CTSD-203ENST00000429746 UXTQ9UBK9 157 aaPredicted RBP18.45■□□□□ 0.54
CTSD-203ENST00000429746 ZNF840PA6NDX5 716 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 HEPACAM2A8MVW5 462 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 KCNJ18B7U540 433 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 CFHP08603 1231 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 TAF10Q12962 218 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 GRM2Q14416 872 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 KCNJ12Q14500 433 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 CWF19L1Q69YN2 538 aaKnown RBP18.44■□□□□ 0.54
CTSD-203ENST00000429746 MFSD6LQ8IWD5 586 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 MAB21L3Q8N8X9 362 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 MED10Q9BTT4 135 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 DUSP16Q9BY84 665 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 NDST4Q9H3R1 872 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 FANCLQ9NW38 375 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 FBXL21Q9UKT6 434 aa18.44■□□□□ 0.54
CTSD-203ENST00000429746 BECN2A8MW95 431 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 TULP2O00295 520 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 O00370 1275 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 GABBR2O75899 941 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 OAS1P00973 400 aaKnown RBP18.43■□□□□ 0.54
CTSD-203ENST00000429746 FAM200BP0CF97 657 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 DDX6P26196 483 aaKnown RBP eCLIP18.43■□□□□ 0.54
CTSD-203ENST00000429746 EEF1GP26641 437 aaKnown RBP18.43■□□□□ 0.54
CTSD-203ENST00000429746 ANXA13P27216 316 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 MTIF2P46199 727 aaKnown RBP18.43■□□□□ 0.54
CTSD-203ENST00000429746 MRE11P49959 708 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 TAF12Q16514 161 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 VWA3BQ502W6 1294 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 SNX30Q5VWJ9 437 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 SASS6Q6UVJ0 657 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 ALYREFQ86V81 257 aaKnown RBP18.43■□□□□ 0.54
CTSD-203ENST00000429746 HEXIM2Q96MH2 286 aaKnown RBP18.43■□□□□ 0.54
CTSD-203ENST00000429746 CYP2S1Q96SQ9 504 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 SLITRK6Q9H5Y7 841 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 PNPLA8Q9NP80 782 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 OBP2AQ9NY56 170 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 ATP8B3O60423 1300 aa18.43■□□□□ 0.54
CTSD-203ENST00000429746 PSMC3P17980 439 aa18.42■□□□□ 0.54
CTSD-203ENST00000429746 AOC1P19801 751 aa18.42■□□□□ 0.54
CTSD-203ENST00000429746 ZNF268Q14587 947 aaPredicted RBP18.42■□□□□ 0.54
CTSD-203ENST00000429746 KRT31Q15323 416 aa18.42■□□□□ 0.54
CTSD-203ENST00000429746 TPD52L1Q16890 204 aaPredicted RBP18.42■□□□□ 0.54
CTSD-203ENST00000429746 ARHGAP15Q53QZ3 475 aa18.42■□□□□ 0.54
CTSD-203ENST00000429746 RAB41Q5JT25 222 aa18.42■□□□□ 0.54
CTSD-203ENST00000429746 TMEM270Q6UE05 265 aa18.42■□□□□ 0.54
CTSD-203ENST00000429746 GBP6Q6ZN66 633 aa18.42■□□□□ 0.54
CTSD-203ENST00000429746 BHLHA9Q7RTU4 235 aa18.42■□□□□ 0.54
CTSD-203ENST00000429746 FAM114A1Q8IWE2 563 aa18.42■□□□□ 0.54
CTSD-203ENST00000429746 MRPS31Q92665 395 aaKnown RBP18.42■□□□□ 0.54
CTSD-203ENST00000429746 DDX23Q9BUQ8 820 aaKnown RBP18.42■□□□□ 0.54
CTSD-203ENST00000429746 RNF38Q9H0F5 515 aa18.42■□□□□ 0.54
CTSD-203ENST00000429746 OSER1Q9NX31 292 aa18.42■□□□□ 0.54
CTSD-203ENST00000429746 TSPAN16Q9UKR8 245 aa18.42■□□□□ 0.54
CTSD-203ENST00000429746 USP3Q9Y6I4 520 aa18.42■□□□□ 0.54
CTSD-203ENST00000429746 PTPRZ1P23471 2315 aaPredicted RBP18.41■□□□□ 0.54
CTSD-203ENST00000429746 RTN3O95197 1032 aaPredicted RBP18.41■□□□□ 0.54
CTSD-203ENST00000429746 PAEPP09466 180 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 YWHAQP27348 245 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 KIF11P52732 1056 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 MYL5Q02045 173 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 CETN1Q12798 172 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 USP4Q13107 963 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 EXOC3L4Q17RC7 722 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 ANO6Q4KMQ2 910 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 DHX40Q8IX18 779 aaKnown RBP18.41■□□□□ 0.54
CTSD-203ENST00000429746 ZNF687Q8N1G0 1237 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 ARL14EPQ8N8R7 260 aaPredicted RBP18.41■□□□□ 0.54
CTSD-203ENST00000429746 TMEM105Q8N8V8 129 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 ANKRD52Q8NB46 1076 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 RBBP8NLQ8NC74 664 aaPredicted RBP18.41■□□□□ 0.54
CTSD-203ENST00000429746 DEPDC1BQ8WUY9 529 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 SHC3Q92529 594 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 JAKMIP2Q96AA8 810 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 CHFRQ96EP1 664 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 ZFRQ96KR1 1074 aaKnown RBP18.41■□□□□ 0.54
CTSD-203ENST00000429746 GCNAQ96QF7 691 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 NMUR1Q9HB89 426 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 UBE2TQ9NPD8 197 aaPredicted RBP18.41■□□□□ 0.54
CTSD-203ENST00000429746 ACP6Q9NPH0 428 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 COMMD8Q9NX08 183 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 TAB2Q9NYJ8 693 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 APEX2Q9UBZ4 518 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 ZMYM5Q9UJ78 669 aa18.41■□□□□ 0.54
CTSD-203ENST00000429746 RIF1Q5UIP0 2472 aaKnown RBP18.41■□□□□ 0.54
CTSD-203ENST00000429746 VDRP11473 427 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 TCF3P15923 654 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 YWHAEP62258 255 aaKnown RBP18.4■□□□□ 0.54
CTSD-203ENST00000429746 ZNF77Q15935 545 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 GOLGA7BQ2TAP0 167 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 LCLAT1Q6UWP7 414 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 CREBRFQ8IUR6 639 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 SIX5Q8N196 739 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 OVCA2Q8WZ82 227 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 E2F7Q96AV8 911 aa18.4■□□□□ 0.54
CTSD-203ENST00000429746 BPIFA3Q9BQP9 254 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms