RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 UBXN8O00124 270 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 Q4G0T1 1027 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 MDH1BQ5I0G3 518 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 SLFN11Q7Z7L1 901 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 SH3GL3Q99963 347 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 TRPM5Q9NZQ8 1165 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 RNF112Q9ULX5 631 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 MAGEB16A2A368 324 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 DCDC2CA8MYV0 355 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 VCAM1P19320 739 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 VHLP40337 213 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 NUP107P57740 925 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 SLC29A2Q14542 456 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 SMTNL2Q2TAL5 461 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 MROH9Q5TGP6 573 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 FBXO32Q969P5 355 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 CTNNAL1Q9UBT7 734 aa13.24□□□□□ -0.29
LDB3-205ENST00000429277 ZBTB12Q9Y330 459 aaPredicted RBP13.24□□□□□ -0.29
LDB3-205ENST00000429277 NPM3O75607 178 aaKnown RBP13.23□□□□□ -0.29
LDB3-205ENST00000429277 FDPSP14324 419 aaKnown RBP13.23□□□□□ -0.29
LDB3-205ENST00000429277 GRK3P35626 688 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 ITIH4Q14624 930 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 HERC6Q8IVU3 1022 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 KIAA2013Q8IYS2 634 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 TERB1Q8NA31 727 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 TSEN34Q9BSV6 310 aaKnown RBP13.23□□□□□ -0.29
LDB3-205ENST00000429277 SLC24A2Q9UI40 661 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 CAND2O75155 1236 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 RARGP13631 454 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 CYLC2Q14093 348 aaPredicted RBP13.23□□□□□ -0.29
LDB3-205ENST00000429277 EXD1Q8NHP7 514 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 CCT7Q99832 543 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 EPS8L2Q9H6S3 715 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 COPS7BQ9H9Q2 264 aaPredicted RBP13.23□□□□□ -0.29
LDB3-205ENST00000429277 EXOSC4Q9NPD3 245 aaKnown RBP13.23□□□□□ -0.29
LDB3-205ENST00000429277 PON1P27169 355 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 RRM2P31350 389 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 RAB27AP51159 221 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 CAMK2GQ13555 558 aaPredicted RBP13.23□□□□□ -0.29
LDB3-205ENST00000429277 PTGISQ16647 500 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 ERAP2Q6P179 960 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 KDM7AQ6ZMT4 941 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 CYP4Z1Q86W10 505 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 C4orf19Q8IY42 314 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 ZDHHC15Q96MV8 337 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 ADGRE3Q9BY15 652 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 TMEM39BQ9GZU3 492 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 TBC1D13Q9NVG8 400 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 PDP2Q9P2J9 529 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 PMPCBO75439 489 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 USP1O94782 785 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 EIF2S1P05198 315 aaKnown RBP13.23□□□□□ -0.29
LDB3-205ENST00000429277 ACO1P21399 889 aaKnown RBP13.23□□□□□ -0.29
LDB3-205ENST00000429277 SYCP2LQ5T4T6 812 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 ZNF544Q6NX49 715 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 MICU2Q8IYU8 434 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 RIN3Q8TB24 985 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 CLPBQ9H078 707 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 AP4S1Q9Y587 144 aa13.23□□□□□ -0.29
LDB3-205ENST00000429277 O00370 1275 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 RASSF9O75901 435 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 RFX5P48382 616 aaPredicted RBP13.22□□□□□ -0.29
LDB3-205ENST00000429277 RENBPP51606 427 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 PCNX4Q63HM2 1172 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 ZNF280DQ6N043 979 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 ARID3BQ8IVW6 561 aaPredicted RBP13.22□□□□□ -0.29
LDB3-205ENST00000429277 DNERQ8NFT8 737 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 MAGEB18Q96M61 343 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 THAP2Q9H0W7 228 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 KCNF1Q9H3M0 494 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 KANSL3Q9P2N6 904 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 LNPEPQ9UIQ6 1025 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 B3GAT3O94766 335 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 FCGR1AP12314 374 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 PRKAA2P54646 552 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 GRB10Q13322 594 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 ZDHHC17Q8IUH5 632 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 CLEC10AQ8IUN9 316 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 SLC22A9Q8IVM8 553 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 ACTRT1Q8TDG2 376 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 TUBGCP3Q96CW5 907 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 IL17RAQ96F46 866 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 PI4K2AQ9BTU6 479 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 TMCC3Q9ULS5 477 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 PRG3Q9Y2Y8 225 aaPredicted RBP13.22□□□□□ -0.29
LDB3-205ENST00000429277 DYRK1BQ9Y463 629 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 SUPT7LO94864 414 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 URODP06132 367 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 HNRNPCP07910 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
LDB3-205ENST00000429277 THPOP40225 353 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 CHRNB3Q05901 458 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 WDR93Q6P2C0 686 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 INPP5DQ92835 1189 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 TBCBQ99426 244 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 PDGFCQ9NRA1 345 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 SATB2Q9UPW6 733 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 CYTH3O43739 400 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 LZTS3O60299 673 aaPredicted RBP13.22□□□□□ -0.29
LDB3-205ENST00000429277 ZNF438Q7Z4V0 828 aa13.22□□□□□ -0.29
LDB3-205ENST00000429277 ITIH5Q86UX2 942 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms