RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 CBX6O95503 412 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 HMGCRP04035 888 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 GSTA2P09210 222 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 HARSP12081 509 aaKnown RBP8.22□□□□□ -1.09
LRCH3-204ENST00000428136 ATICP31939 592 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 GMPSP49915 693 aaPredicted RBP8.22□□□□□ -1.09
LRCH3-204ENST00000428136 DYNLT1P63172 113 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 TFAMQ00059 246 aaKnown RBP8.22□□□□□ -1.09
LRCH3-204ENST00000428136 BLMHQ13867 455 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 SMTNL2Q2TAL5 461 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 FAM47CQ5HY64 1035 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 CAPN12Q6ZSI9 719 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.22□□□□□ -1.09
LRCH3-204ENST00000428136 FAM71DQ8N9W8 422 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 SERAC1Q96JX3 654 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 MIPEPQ99797 713 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 PDGFDQ9GZP0 370 aaPredicted RBP8.22□□□□□ -1.09
LRCH3-204ENST00000428136 NPHS2Q9NP85 383 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 METTL5Q9NRN9 209 aaKnown RBP8.22□□□□□ -1.09
LRCH3-204ENST00000428136 ASNSD1Q9NWL6 643 aa8.22□□□□□ -1.09
LRCH3-204ENST00000428136 ZSWIM8A7E2V4 1837 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 PAPPA2Q9BXP8 1791 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 TCRBV9S1A1TA0A576 114 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 ZNF487B1APH4 448 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 NFKBIEO00221 500 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 TRDMT1O14717 391 aaKnown RBP8.21□□□□□ -1.09
LRCH3-204ENST00000428136 MICAL2O94851 1124 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 LUC7L3O95232 432 aaKnown RBP8.21□□□□□ -1.09
LRCH3-204ENST00000428136 STAU1O95793 577 aaKnown RBP8.21□□□□□ -1.09
LRCH3-204ENST00000428136 RBP3P10745 1247 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 MARK3P27448 753 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 ELK3P41970 407 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 PSMC4P43686 418 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 ZNF200P98182 395 aaPredicted RBP8.21□□□□□ -1.09
LRCH3-204ENST00000428136 POU5F1BQ06416 359 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 FAM187BQ17R55 369 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 ATF7IP2Q5U623 682 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 C4orf50Q6ZRC1 276 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 RFX6Q8HWS3 928 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 APOBEC3FQ8IUX4 373 aaKnown RBP8.21□□□□□ -1.09
LRCH3-204ENST00000428136 PEBP4Q96S96 227 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 GPR20Q99678 358 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 BTBD10Q9BSF8 475 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 TCHPQ9BT92 498 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 TRIM55Q9BYV6 548 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 ELOVL4Q9GZR5 314 aa8.21□□□□□ -1.09
LRCH3-204ENST00000428136 MMADHCQ9H3L0 296 aaPredicted RBP8.21□□□□□ -1.09
LRCH3-204ENST00000428136 DENND2DQ9H6A0 471 aaPredicted RBP8.21□□□□□ -1.09
LRCH3-204ENST00000428136 A6NHS1 94 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 FZD9O00144 591 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 CCDC22O60826 627 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 SMNDC1O75940 238 aaKnown RBP eCLIP8.21□□□□□ -1.1
LRCH3-204ENST00000428136 MT-ND3P03897 115 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 PRKCHP24723 683 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 EPHB2P29323 1055 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 CCNFP41002 786 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 CDK16Q00536 496 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 ROR1Q01973 937 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 PTPN11Q06124 597 aaPredicted RBP8.21□□□□□ -1.1
LRCH3-204ENST00000428136 TAF5Q15542 800 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 ZNF667Q5HYK9 610 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 C1orf127Q8N9H9 656 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 RNF149Q8NC42 400 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 SPATA18Q8TC71 538 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 TMEM176AQ96HP8 235 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 NAF1Q96HR8 494 aaKnown RBP8.21□□□□□ -1.1
LRCH3-204ENST00000428136 CNPY3Q9BT09 278 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 TSSK1BQ9BXA7 367 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 CADM1Q9BY67 442 aaKnown RBP8.21□□□□□ -1.1
LRCH3-204ENST00000428136 DCLRE1BQ9H816 532 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 PLAC1Q9HBJ0 212 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 CORO1CQ9ULV4 474 aaPredicted RBP8.21□□□□□ -1.1
LRCH3-204ENST00000428136 PPP2R3BQ9Y5P8 575 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 LTBP3Q9NS15 1303 aa8.21□□□□□ -1.1
LRCH3-204ENST00000428136 PTPRFP10586 1907 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 GOLGB1Q14789 3259 aaKnown RBP8.2□□□□□ -1.1
LRCH3-204ENST00000428136 C2CD4BA6NLJ0 364 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 SOCS7O14512 581 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 DPYSL4O14531 572 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 LPXNO60711 386 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 VDRP11473 427 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 IBSPP21815 317 aaPredicted RBP8.2□□□□□ -1.1
LRCH3-204ENST00000428136 IL4RP24394 825 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 MAGEA3P43357 314 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 MBTD1Q05BQ5 628 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 INCA1Q0VD86 236 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 PTK7Q13308 1070 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 TFDP2Q14188 446 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 PDK2Q15119 407 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 BBS9Q3SYG4 887 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 SCARA5Q6ZMJ2 495 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 IFNLR1Q8IU57 520 aaPredicted RBP8.2□□□□□ -1.1
LRCH3-204ENST00000428136 EMC1Q8N766 993 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 SLC16A10Q8TF71 515 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 NSL1Q96IY1 281 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 TWNKQ96RR1 684 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 TTLL3Q9Y4R7 772 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 BCLAF3A2AJT9 711 aaKnown RBP8.2□□□□□ -1.1
LRCH3-204ENST00000428136 CFAP69A5D8W1 941 aa8.2□□□□□ -1.1
LRCH3-204ENST00000428136 KBTBD13C9JR72 458 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms