RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 UPB1Q9UBR1 384 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 SPHKAPQ2M3C7 1700 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 HSBP1L1C9JCN9 74 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 SCTRP47872 440 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 COPZ1P61923 177 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 PAPD4Q6PIY7 484 aaKnown RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 SYTL1Q8IYJ3 562 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 PCDH19Q8TAB3 1148 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 SUN3Q8TAQ9 357 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 PRAM1Q96QH2 718 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 CYP26B1Q9NR63 512 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 AP4E1Q9UPM8 1137 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 HSPB11Q9Y547 144 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 IFRD1O00458 451 aaPredicted RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 CST8O60676 142 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 ULK1O75385 1050 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 CCNE2O96020 404 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 RPLP0P05388 317 aaKnown RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 CCT2P78371 535 aaKnown RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 MACC1Q6ZN28 852 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 ZBTB8OSQ8IWT0 167 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 STOML3Q8TAV4 291 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 MIPEPQ99797 713 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 INO80BQ9C086 356 aaPredicted RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 STN1Q9H668 368 aaKnown RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 STX8Q9UNK0 236 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 PCDHGB3Q9Y5G1 929 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 AGTP01019 485 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 GNAO1P09471 354 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 IFIT1P09914 478 aaKnown RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 IRAK1P51617 712 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 PTRHD1Q6GMV3 140 aaKnown RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 SPOPLQ6IQ16 392 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 NSMCE3Q96MG7 304 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 FOXP1Q9H334 677 aaPredicted RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 GPR89AB7ZAQ6 455 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 BTN3A1O00481 513 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 GPR89BP0CG08 455 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 ALCAMQ13740 583 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 GRB14Q14449 540 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 MINDY4Q4G0A6 757 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 PDIK1LQ8N165 341 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 NOL11Q9H8H0 719 aaKnown RBP8.04□□□□□ -1.12
LINC00649-203ENST00000427447 TMEM138Q9NPI0 162 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 PCDHGA8Q9Y5G5 932 aa8.04□□□□□ -1.12
LINC00649-203ENST00000427447 H2AFYO75367 372 aaKnown RBP8.03□□□□□ -1.12
LINC00649-203ENST00000427447 IDO1P14902 403 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 EPCAMP16422 314 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 GNAQP50148 359 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 PLTPP55058 493 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 ECT2LQ008S8 904 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 AMPD2Q01433 879 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 PLOD1Q02809 727 aaPredicted RBP8.03□□□□□ -1.12
LINC00649-203ENST00000427447 PRMT9Q6P2P2 845 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 METTL13Q8N6R0 699 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 TMCO6Q96DC7 493 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 LIN37Q96GY3 246 aaPredicted RBP8.03□□□□□ -1.12
LINC00649-203ENST00000427447 SLC29A1Q99808 456 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 CLEC4AQ9UMR7 237 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 H7C0C1 242 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 SERPINA3P01011 423 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 PIK3CGP48736 1102 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 RAB30Q15771 203 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 PTGISQ16647 500 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 CDC37L1Q7L3B6 337 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 CATSPER4Q7RTX7 472 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 CLVS1Q8IUQ0 354 aaPredicted RBP8.03□□□□□ -1.12
LINC00649-203ENST00000427447 IFT43Q96FT9 208 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 C17orf80Q9BSJ5 609 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 CNTRLQ7Z7A1 2325 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 NSD3Q9BZ95 1437 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 C15orf38-AP3S2A0A0A6YYH1 394 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 UBXN8O00124 270 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 IFNB1P01574 187 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 VAMP1P23763 118 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 RAB5CP51148 216 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 PDE1AP54750 535 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 PRMT2P55345 433 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 DSG2Q14126 1118 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 STXBP2Q15833 593 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 USP39Q53GS9 565 aaKnown RBP8.03□□□□□ -1.12
LINC00649-203ENST00000427447 FRMD7Q6ZUT3 714 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 LRRC47Q8N1G4 583 aaKnown RBP8.03□□□□□ -1.12
LINC00649-203ENST00000427447 ATG4AQ8WYN0 398 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 COPS4Q9BT78 406 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 LCMT1Q9UIC8 334 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 GAKO14976 1311 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 POLR1CO15160 346 aaPredicted RBP8.03□□□□□ -1.12
LINC00649-203ENST00000427447 MAP3K6O95382 1288 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 RALAP11233 206 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 RPL17P18621 184 aaKnown RBP8.03□□□□□ -1.12
LINC00649-203ENST00000427447 CRTC1Q6UUV9 634 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 COQ8AQ8NI60 647 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 SNX19Q92543 992 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 ZKSCAN4Q969J2 545 aaPredicted RBP8.03□□□□□ -1.12
LINC00649-203ENST00000427447 PTTG2Q9NZH5 202 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 NDUFA10O95299 355 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 LRRC24Q50LG9 513 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 SNX30Q5VWJ9 437 aa8.03□□□□□ -1.12
LINC00649-203ENST00000427447 MTHFD1LQ6UB35 978 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms