RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 TMEFF1Q8IYR6 380 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ALLCQ8N6M5 410 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 KDF1Q8NAX2 398 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 MDGA1Q8NFP4 955 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 HMGB4Q8WW32 186 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 TNIP3Q96KP6 325 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 PKMYT1Q99640 499 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 CBWD1Q9BRT8 395 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 MED10Q9BTT4 135 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 PANK2Q9BZ23 570 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 POLR3BQ9NW08 1133 aaPredicted RBP13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 COMMD8Q9NX08 183 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 CFAP97Q9P2B7 532 aa13.06□□□□□ -0.32
HLA-DQB3-203ENST00000425319 A0A0A0MRY4 1105 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 F8VP50 259 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 OPHN1O60890 802 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ATP2C2O75185 946 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 NDUFS2O75306 463 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 TADA3O75528 432 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 DLATP10515 647 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 P4HA1P13674 534 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 GNSP15586 552 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 PTPN1P18031 435 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 LMO2P25791 158 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ATICP31939 592 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 MAPK8P45983 427 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 KCNA1Q09470 495 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 TAF10Q12962 218 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ANO4Q32M45 955 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 HECTD3Q5T447 861 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SLC23A3Q6PIS1 610 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 TRAPPC11Q7Z392 1133 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 IL17RCQ8NAC3 791 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 RDH13Q8NBN7 331 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 DEFB124Q8NES8 71 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 FBXO32Q969P5 355 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SYAP1Q96A49 352 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 DNAJC19Q96DA6 116 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 PCED1BQ96HM7 432 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SCNM1Q9BWG6 230 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 TTLL2Q9BWV7 592 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 GTPBP2Q9BX10 602 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 CUEDC2Q9H467 287 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SMPD4Q9NXE4 827 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 LSM7Q9UK45 103 aaKnown RBP13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 CLIC4Q9Y696 253 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 COL4A2P08572 1712 aa13.05□□□□□ -0.32
HLA-DQB3-203ENST00000425319 DMXL1Q9Y485 3027 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 CACNA1BQ00975 2339 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 TCRBV21S2A2A0A5A6 115 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 C1QTNF9BB2RNN3 333 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 CDX4O14627 284 aaPredicted RBP13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 GIPC1O14908 333 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 CYP17A1P05093 508 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 C1QTNF9P0C862 333 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ENGP17813 658 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 AP3M2P53677 418 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 RPL6Q02878 288 aaKnown RBP13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 CEBPZQ03701 1054 aaKnown RBP13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 GRIN1Q05586 938 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ARMCX6Q7L4S7 300 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ZNF513Q8N8E2 541 aaPredicted RBP13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 OLIG1Q8TAK6 271 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SCFD1Q8WVM8 642 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 RLN3Q8WXF3 142 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 RNF38Q9H0F5 515 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 ZSCAN16Q9H4T2 348 aaPredicted RBP13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 HSPBP1Q9NZL4 362 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 WDR35Q9P2L0 1181 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 CGNQ9P2M7 1197 aaKnown RBP13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SUSD2Q9UGT4 822 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 NEUROG3Q9Y4Z2 214 aa13.04□□□□□ -0.32
HLA-DQB3-203ENST00000425319 RALGAPA1Q6GYQ0 2036 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 PATE3B3GLJ2 98 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 EIF3DO15371 548 aaKnown RBP eCLIP13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SERPINF2P08697 491 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 NTSR1P30989 418 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SLC6A11P48066 632 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SIM1P81133 766 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 NAIF1Q69YI7 327 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 RHBDF2Q6PJF5 856 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 TMEM92Q6UXU6 159 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 RGL4Q8IZJ4 473 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 XXYLT1Q8NBI6 393 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 RIN3Q8TB24 985 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 EZH1Q92800 747 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 TNMDQ9H2S6 317 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 IKZF4Q9H2S9 585 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 FBXO44Q9H4M3 255 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 CRTAC1Q9NQ79 661 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 NXF1Q9UBU9 619 aaKnown RBP13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 CHORDC1Q9UHD1 332 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 SIX4Q9UIU6 781 aa13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 FBXO2Q9UK22 296 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 NUP210Q8TEM1 1887 aaPredicted RBP13.03□□□□□ -0.32
HLA-DQB3-203ENST00000425319 DMDP11532 3685 aa13.02□□□□□ -0.32
HLA-DQB3-203ENST00000425319 PDCD11Q14690 1871 aaKnown RBP13.02□□□□□ -0.32
HLA-DQB3-203ENST00000425319 UPK3BL1B0FP48 263 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms