RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SPTAN1Q13813 2472 aaKnown RBP6.82□□□□□ -1.32
SDCBP-203ENST00000424270 CYP3A7-CYP3A51PA0A087WV96 503 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 CCDC169A6NNP5 214 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 H0Y8X5 98 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 K7ERI5 159 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 LEFTY2O00292 366 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 XPOTO43592 962 aaKnown RBP6.81□□□□□ -1.32
SDCBP-203ENST00000424270 PCDHGA12O60330 932 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 NFICP08651 508 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 HAPLN1P10915 354 aaPredicted RBP6.81□□□□□ -1.32
SDCBP-203ENST00000424270 CYP3A7P24462 503 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 RBMS1P29558 406 aaKnown RBP6.81□□□□□ -1.32
SDCBP-203ENST00000424270 CDC27P30260 824 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 OXTRP30559 389 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 ADD1P35611 737 aaKnown RBP6.81□□□□□ -1.32
SDCBP-203ENST00000424270 NAMPTP43490 491 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 GPR15P49685 360 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 RARRES1P49788 294 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 INHBCP55103 352 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 RPL10AP62906 217 aaKnown RBP6.81□□□□□ -1.32
SDCBP-203ENST00000424270 BNC1Q01954 994 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 GAD2Q05329 585 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 MESP2Q0VG99 397 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 LAYNQ6UX15 382 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 USP53Q70EK8 1073 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 TMEM150AQ86TG1 271 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 C12orf40Q86WS4 652 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 DCP1BQ8IZD4 617 aaKnown RBP6.81□□□□□ -1.32
SDCBP-203ENST00000424270 EXD3Q8N9H8 876 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 KCNV2Q8TDN2 545 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 CCDC97Q96F63 343 aaPredicted RBP6.81□□□□□ -1.32
SDCBP-203ENST00000424270 VCPIP1Q96JH7 1222 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 MRGPRX1Q96LB2 322 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 TCEANC2Q96MN5 208 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 MMS19Q96T76 1030 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 EIF2AK1Q9BQI3 630 aaKnown RBP6.81□□□□□ -1.32
SDCBP-203ENST00000424270 CDT1Q9H211 546 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 CNTN3Q9P232 1028 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 PLEKHB1Q9UF11 243 aaPredicted RBP6.81□□□□□ -1.32
SDCBP-203ENST00000424270 BRPF3Q9ULD4 1205 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 TNFSF13BQ9Y275 285 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 NFE2L3Q9Y4A8 694 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 DOPEY2Q9Y3R5 2298 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 COL12A1Q99715 3063 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 ABCA12Q86UK0 2595 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 MYO16Q9Y6X6 1858 aa6.81□□□□□ -1.32
SDCBP-203ENST00000424270 UBR5O95071 2799 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-203ENST00000424270 HELZP42694 1942 aaKnown RBP6.8□□□□□ -1.32
SDCBP-203ENST00000424270 CEP192Q8TEP8 1941 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 GON4LQ3T8J9 2241 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 A0A1W2PQF6 199 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 ARHGEF35A5YM69 484 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 C2orf78A6NCI8 922 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 METTL12A8MUP2 240 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 CCER2I3L3R5 266 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 K7ENP7 123 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 TRIM66O15016 1216 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 PRPF3O43395 683 aaKnown RBP6.8□□□□□ -1.32
SDCBP-203ENST00000424270 DFNA5O60443 496 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 SYNCRIPO60506 623 aaKnown RBP6.8□□□□□ -1.32
SDCBP-203ENST00000424270 USP12O75317 370 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 PPFIA2O75334 1257 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 SLITRK3O94933 977 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 EDN1P05305 212 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 FAM87AP0C7U9 286 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 HMGA1P17096 107 aaKnown RBP6.8□□□□□ -1.32
SDCBP-203ENST00000424270 TYMPP19971 482 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 ELAVL4P26378 380 aaKnown RBP6.8□□□□□ -1.32
SDCBP-203ENST00000424270 ACADVLP49748 655 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 TSPY1Q01534 308 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 SMARCB1Q12824 385 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 DDR2Q16832 855 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 SEZ6Q53EL9 994 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 HS1BP3Q53T59 392 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 DOPEY1Q5JWR5 2465 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 NT5DC1Q5TFE4 455 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 EGFLAMQ63HQ2 1017 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 GRAMD4Q6IC98 578 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 FBXL19Q6PCT2 694 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 INO80CQ6PI98 192 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-203ENST00000424270 FOXR1Q6PIV2 292 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 MOXD1Q6UVY6 613 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 ALKAL1Q6UXT8 129 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 SCN4BQ8IWT1 228 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 SLFN12Q8IYM2 578 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 OR10T2Q8NGX3 314 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 PRCCQ92733 491 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-203ENST00000424270 EXTL1Q92935 676 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 SKA1Q96BD8 255 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 SENP8Q96LD8 212 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 NUP58Q9BVL2 599 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 MRPL4Q9BYD3 311 aaKnown RBP6.8□□□□□ -1.32
SDCBP-203ENST00000424270 ACE2Q9BYF1 805 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-203ENST00000424270 CCDC113Q9H0I3 377 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 ZCWPW1Q9H0M4 648 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 STARD5Q9NSY2 213 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 WSB2Q9NYS7 404 aaPredicted RBP6.8□□□□□ -1.32
SDCBP-203ENST00000424270 HSPBP1Q9NZL4 362 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 CFAP97Q9P2B7 532 aa6.8□□□□□ -1.32
SDCBP-203ENST00000424270 ADAMTS1Q9UHI8 967 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms