RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 TMTC3Q6ZXV5 915 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 POLNQ7Z5Q5 900 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 RAB11FIP4Q86YS3 637 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 HERC6Q8IVU3 1022 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 PPTC7Q8NI37 304 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 IL17DQ8TAD2 202 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 BICD2Q8TD16 824 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 CEP89Q96ST8 783 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 ALG1Q9BT22 464 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 FTOQ9C0B1 505 aaKnown RBP eCLIP6.37□□□□□ -1.39
LINC00458-201ENST00000423442 KCNH6Q9H252 994 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 ALDH8A1Q9H2A2 487 aaPredicted RBP6.37□□□□□ -1.39
LINC00458-201ENST00000423442 UBE2ZQ9H832 354 aaPredicted RBP6.37□□□□□ -1.39
LINC00458-201ENST00000423442 IPPKQ9H8X2 491 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 PDRG1Q9NUG6 133 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 COL20A1Q9P218 1284 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 NR2E1Q9Y466 385 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 SLC30A1Q9Y6M5 507 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 LCTP09848 1927 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 PTPRSQ13332 1948 aa6.37□□□□□ -1.39
LINC00458-201ENST00000423442 LCHNA4D1U4 455 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 KIF28PB7ZC32 967 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 PRPF3O43395 683 aaKnown RBP6.36□□□□□ -1.39
LINC00458-201ENST00000423442 DCXO43602 365 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 CUTAO60888 179 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 CDKL5O76039 1030 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 PARNO95453 639 aaKnown RBP6.36□□□□□ -1.39
LINC00458-201ENST00000423442 PFKMP08237 780 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 MMP3P08254 477 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 CYP2C9P11712 490 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 CPA1P15085 419 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 XBP1P17861 261 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 KCNA5P22460 613 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 MCM7P33993 719 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 GPR85P60893 370 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 DUSP8Q13202 625 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 MTMR1Q13613 665 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 ANKRD1Q15327 319 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 TBR1Q16650 682 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 KIAA0753Q2KHM9 967 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 TMEM63BQ5T3F8 832 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 PHOSPHO2Q8TCD6 241 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 GDPD5Q8WTR4 605 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 PLEKHG4BQ96PX9 1271 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 SENP7Q9BQF6 1050 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 AARSD1Q9BTE6 412 aaKnown RBP6.36□□□□□ -1.39
LINC00458-201ENST00000423442 TM6SF1Q9BZW5 370 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 C12orf65Q9H3J6 166 aaKnown RBP6.36□□□□□ -1.39
LINC00458-201ENST00000423442 AZI2Q9H6S1 392 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 RIC8AQ9NPQ8 531 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 ARHGEF4Q9NR80 690 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 TCEAL9Q9UHQ7 104 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 ZNF215Q9UL58 517 aaPredicted RBP6.36□□□□□ -1.39
LINC00458-201ENST00000423442 PCDHA6Q9UN73 950 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 PCDHA8Q9Y5H6 950 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 BRWD1Q9NSI6 2320 aa6.36□□□□□ -1.39
LINC00458-201ENST00000423442 FAM47E-STBD1D6RA91 191 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 MEIS2O14770 477 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 ARIH2O95376 493 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 PABPC1P11940 636 aaKnown RBP6.35□□□□□ -1.39
LINC00458-201ENST00000423442 SCG2P13521 617 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 PDIA3P30101 505 aaKnown RBP6.35□□□□□ -1.39
LINC00458-201ENST00000423442 ICAM3P32942 547 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 RFC2P35250 354 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 NLRP5P59047 1200 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 CCT2P78371 535 aaKnown RBP6.35□□□□□ -1.39
LINC00458-201ENST00000423442 SP4Q02446 784 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 DPTQ07507 201 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 ARHGAP1Q07960 439 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 PFKFB3Q16875 520 aaPredicted RBP6.35□□□□□ -1.39
LINC00458-201ENST00000423442 ZMAT1Q5H9K5 638 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 BTBD8Q5XKL5 378 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 METTL7BQ6UX53 244 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 TMCO2Q7Z6W1 182 aaPredicted RBP6.35□□□□□ -1.39
LINC00458-201ENST00000423442 FBXL16Q8N461 479 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 ZNF808Q8N4W9 903 aaPredicted RBP6.35□□□□□ -1.39
LINC00458-201ENST00000423442 CCDC148Q8NFR7 591 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 HNRNPLLQ8WVV9 542 aaKnown RBP6.35□□□□□ -1.39
LINC00458-201ENST00000423442 NEU4Q8WWR8 484 aaPredicted RBP6.35□□□□□ -1.39
LINC00458-201ENST00000423442 SEPT1Q8WYJ6 367 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 GLG1Q92896 1179 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 ZNF274Q96GC6 653 aaPredicted RBP6.35□□□□□ -1.39
LINC00458-201ENST00000423442 DRC1Q96MC2 740 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 INPP4AQ96PE3 977 aaPredicted RBP6.35□□□□□ -1.39
LINC00458-201ENST00000423442 ZFYVE21Q9BQ24 234 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 SDF4Q9BRK5 362 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 SLC26A6Q9BXS9 759 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 TRMT13Q9NUP7 481 aaKnown RBP6.35□□□□□ -1.39
LINC00458-201ENST00000423442 BARHL2Q9NY43 387 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 MTUS1Q9ULD2 1270 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 ZNF318Q5VUA4 2279 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 TRIOO75962 3097 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 CFAP54Q96N23 3096 aa6.35□□□□□ -1.39
LINC00458-201ENST00000423442 MYH9P35579 1960 aaKnown RBP6.35□□□□□ -1.39
LINC00458-201ENST00000423442 C17orf102A2RUQ5 167 aa6.34□□□□□ -1.39
LINC00458-201ENST00000423442 FAM90A27PA6NNH2 459 aa6.34□□□□□ -1.39
LINC00458-201ENST00000423442 IQCF3P0C7M6 154 aa6.34□□□□□ -1.39
LINC00458-201ENST00000423442 ETV4P43268 484 aa6.34□□□□□ -1.39
LINC00458-201ENST00000423442 ANAPC15P60006 121 aa6.34□□□□□ -1.39
LINC00458-201ENST00000423442 MRPS9P82933 396 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms