RNA–Protein interactions for RNA: ENST00000422866.1

PEX1-202, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 5

Gene PEX1, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-202ENST00000422866 PDRG1Q9NUG6 133 aa4.79□□□□□ -1.64
PEX1-202ENST00000422866 TRPC5Q9UL62 973 aaPredicted RBP4.79□□□□□ -1.64
PEX1-202ENST00000422866 MTMR6Q9Y217 621 aa4.79□□□□□ -1.64
PEX1-202ENST00000422866 IPPQ9Y573 584 aa4.79□□□□□ -1.64
PEX1-202ENST00000422866 HS3ST4Q9Y661 456 aa4.79□□□□□ -1.64
PEX1-202ENST00000422866 CCDC88AQ3V6T2 1871 aa4.79□□□□□ -1.64
PEX1-202ENST00000422866 FOCADQ5VW36 1801 aa4.79□□□□□ -1.64
PEX1-202ENST00000422866 RGPD3A6NKT7 1758 aaPredicted RBP4.78□□□□□ -1.64
PEX1-202ENST00000422866 RGPD4Q7Z3J3 1758 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 SCN9AQ15858 1988 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 MROH5Q6ZUA9 1318 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 WDR33Q9C0J8 1336 aaKnown RBP4.78□□□□□ -1.64
PEX1-202ENST00000422866 SALL1Q9NSC2 1324 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 hCG_2014768A0A024R1R8 64 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 CCDC154A6NI56 674 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 E7EWF7 191 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 OVOL3O00110 214 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 HIP1O00291 1037 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 PRKAB2O43741 272 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 NDUFA10O95299 355 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 FGAP02671 866 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 GYS1P13807 737 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 SYT1P21579 422 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 GCSHP23434 173 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 MCCP23508 829 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 ZFP36P26651 326 aaKnown RBP4.78□□□□□ -1.64
PEX1-202ENST00000422866 GYG1P46976 350 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 CTXN1P60606 82 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 ODF1Q14990 250 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 PUM3Q15397 648 aaKnown RBP4.78□□□□□ -1.64
PEX1-202ENST00000422866 TTC39AQ5SRH9 613 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 DACT2Q5SW24 774 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 PPP4R3AQ6IN85 833 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 PRR5LQ6MZQ0 368 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 CHST3Q7LGC8 479 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 MRGPRGQ86SM5 289 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 MB21D2Q8IYB1 491 aaPredicted RBP4.78□□□□□ -1.64
PEX1-202ENST00000422866 OR56A1Q8NGH5 318 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 RUFY2Q8WXA3 655 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 LPIN2Q92539 896 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 FAM84BQ96KN1 310 aaPredicted RBP4.78□□□□□ -1.64
PEX1-202ENST00000422866 STRBPQ96SI9 672 aaKnown RBP4.78□□□□□ -1.64
PEX1-202ENST00000422866 MYOCQ99972 504 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 TEX101Q9BY14 249 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 C11orf54Q9H0W9 315 aaPredicted RBP4.78□□□□□ -1.64
PEX1-202ENST00000422866 RNPEPQ9H4A4 650 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 CNNM1Q9NRU3 951 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 FBXO34Q9NWN3 711 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.78□□□□□ -1.64
PEX1-202ENST00000422866 LIMCH1Q9UPQ0 1083 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 PCDHA13Q9Y5I0 950 aa4.78□□□□□ -1.64
PEX1-202ENST00000422866 QSER1Q2KHR3 1735 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 ZNF532Q9HCE3 1301 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 SIPA1L1O43166 1804 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 SLX4Q8IY92 1834 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 CENPVL1A0A0U1RR11 272 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 MARCH11A6NNE9 402 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 UBE2Q2LH0YL09 131 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 GPAA1O43292 621 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 SNUPNO95149 360 aaKnown RBP4.77□□□□□ -1.65
PEX1-202ENST00000422866 FDPSP14324 419 aaKnown RBP4.77□□□□□ -1.65
PEX1-202ENST00000422866 DDX6P26196 483 aaKnown RBP eCLIP4.77□□□□□ -1.65
PEX1-202ENST00000422866 RECQLP46063 649 aaPredicted RBP4.77□□□□□ -1.65
PEX1-202ENST00000422866 MCM2P49736 904 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 EVCP57679 992 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 HAND2P61296 217 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 TARDBPQ13148 414 aaKnown RBP eCLIP4.77□□□□□ -1.65
PEX1-202ENST00000422866 UAP1L1Q3KQV9 507 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 C3orf36Q3SXR2 165 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 FAM173BQ6P4H8 233 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 CYB5R4Q7L1T6 521 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 LDLRAD3Q86YD5 345 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 ARHGEF19Q8IW93 802 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 RPUSD2Q8IZ73 545 aaKnown RBP4.77□□□□□ -1.65
PEX1-202ENST00000422866 MIER2Q8N344 545 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 LCORLQ8N3X6 602 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 FITM2Q8N6M3 262 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 SPATA5Q8NB90 893 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 CPEB3Q8NE35 698 aaKnown RBP4.77□□□□□ -1.65
PEX1-202ENST00000422866 NLGN4YQ8NFZ3 816 aaPredicted RBP4.77□□□□□ -1.65
PEX1-202ENST00000422866 PANK2Q9BZ23 570 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 TYW1Q9NV66 732 aaKnown RBP4.77□□□□□ -1.65
PEX1-202ENST00000422866 KLHL11Q9NVR0 708 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 MYH6P13533 1939 aa4.77□□□□□ -1.65
PEX1-202ENST00000422866 NEDD4P46934 1319 aa4.76□□□□□ -1.65
PEX1-202ENST00000422866 POLRMTO00411 1230 aaKnown RBP4.76□□□□□ -1.65
PEX1-202ENST00000422866 KIAA0391O15091 583 aaKnown RBP4.76□□□□□ -1.65
PEX1-202ENST00000422866 LPXNO60711 386 aa4.76□□□□□ -1.65
PEX1-202ENST00000422866 RAMP2O60895 175 aa4.76□□□□□ -1.65
PEX1-202ENST00000422866 CFIP05156 583 aa4.76□□□□□ -1.65
PEX1-202ENST00000422866 MTHFD1P11586 935 aaKnown RBP4.76□□□□□ -1.65
PEX1-202ENST00000422866 XRCC6P12956 609 aaKnown RBP eCLIP4.76□□□□□ -1.65
PEX1-202ENST00000422866 NCLP19338 710 aaKnown RBP4.76□□□□□ -1.65
PEX1-202ENST00000422866 SLC6A2P23975 617 aa4.76□□□□□ -1.65
PEX1-202ENST00000422866 EDNRBP24530 442 aa4.76□□□□□ -1.65
PEX1-202ENST00000422866 GJB2P29033 226 aa4.76□□□□□ -1.65
PEX1-202ENST00000422866 NUCB2P80303 420 aa4.76□□□□□ -1.65
PEX1-202ENST00000422866 PURAQ00577 322 aaKnown RBP4.76□□□□□ -1.65
PEX1-202ENST00000422866 GUCY1B3Q02153 619 aa4.76□□□□□ -1.65
PEX1-202ENST00000422866 IL10RAQ13651 578 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms