RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 CCNYQ8ND76 341 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 CKAP2Q8WWK9 683 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 STAMBPL1Q96FJ0 436 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 SGSM3Q96HU1 749 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 FGD4Q96M96 766 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 AGAP3Q96P47 875 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 VPS33BQ9H267 617 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 CREB3O43889 395 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 HBP1O60381 514 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 CNMDO75829 334 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 PAEPP09466 180 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 FGFR1P11362 822 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 CYP3A5P20815 502 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 ELF3P78545 371 aaPredicted RBP13.95□□□□□ -0.18
MCF2L-213ENST00000421756 NME3Q13232 169 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 RNASEH2BQ5TBB1 312 aaKnown RBP13.95□□□□□ -0.18
MCF2L-213ENST00000421756 EMC10Q5UCC4 262 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 ILDR2Q71H61 639 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 PIGWQ7Z7B1 504 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 PRPF39Q86UA1 669 aaKnown RBP13.95□□□□□ -0.18
MCF2L-213ENST00000421756 ANKRD13AQ8IZ07 590 aa13.95□□□□□ -0.18
MCF2L-213ENST00000421756 NXF3Q9H4D5 531 aaKnown RBP13.95□□□□□ -0.18
MCF2L-213ENST00000421756 RBBP6Q7Z6E9 1792 aaKnown RBP13.95□□□□□ -0.18
MCF2L-213ENST00000421756 ZBED1O96006 694 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 ROR1Q01973 937 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 LMNB2Q03252 620 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 MROH9Q5TGP6 573 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 MPHOSPH6Q99547 160 aaKnown RBP13.94□□□□□ -0.18
MCF2L-213ENST00000421756 KCNG1Q9UIX4 513 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 CFAP69A5D8W1 941 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 CLDN5O00501 218 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 MED7O43513 233 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 MT-ND3P03897 115 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 KRT7P08729 469 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 PYGBP11216 843 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 SAT1P21673 171 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 EIF4BP23588 611 aaKnown RBP13.94□□□□□ -0.18
MCF2L-213ENST00000421756 LMO2P25791 158 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 GCAP28676 217 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 SESN2P58004 480 aaPredicted RBP13.94□□□□□ -0.18
MCF2L-213ENST00000421756 FAAP100Q0VG06 881 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 CGB2Q6NT52 195 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 TRABD2AQ86V40 505 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 NME8Q8N427 588 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 BBOF1Q8ND07 529 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 IQCGQ9H095 443 aaKnown RBP13.94□□□□□ -0.18
MCF2L-213ENST00000421756 MYLK2Q9H1R3 596 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 PDZD7Q9H5P4 517 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 ACTR5Q9H9F9 607 aaPredicted RBP13.94□□□□□ -0.18
MCF2L-213ENST00000421756 NOD2Q9HC29 1040 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 ATAD5Q96QE3 1844 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 CLUHO75153 1309 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 IGKV6D-21A0A0A0MT36 114 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 SIGLEC16A6NMB1 481 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 INHBAP08476 426 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 ZNF132P52740 706 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 SPARCL1Q14515 664 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 ZCCHC23Q6ZST2 131 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 FAM228AQ86W67 206 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 VCPIP1Q96JH7 1222 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 C2orf40Q9H1Z8 148 aa13.94□□□□□ -0.18
MCF2L-213ENST00000421756 C5orf60A6NFR6 353 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 TGFB3P10600 412 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 BEX3Q00994 111 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 SLC25A11Q02978 314 aaKnown RBP13.93□□□□□ -0.18
MCF2L-213ENST00000421756 GBE1Q04446 702 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 OASLQ15646 514 aaKnown RBP13.93□□□□□ -0.18
MCF2L-213ENST00000421756 TRIM68Q6AZZ1 485 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 AGR3Q8TD06 166 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 MAML1Q92585 1016 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 ZMAT2Q96NC0 199 aaKnown RBP13.93□□□□□ -0.18
MCF2L-213ENST00000421756 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 ARMCX1Q9P291 453 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 HESX1Q9UBX0 185 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 PIN4Q9Y237 131 aaKnown RBP13.93□□□□□ -0.18
MCF2L-213ENST00000421756 ARL2BPQ9Y2Y0 163 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 SSC5DA1L4H1 1573 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 CYB561D2O14569 222 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 USP12O75317 370 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 RARBP10826 455 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 CAV1Q03135 178 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 SETDB1Q15047 1291 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 MFSD5Q6N075 450 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 TEX2Q8IWB9 1127 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 SHCBP1LQ9BZQ2 653 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 STRIP2Q9ULQ0 834 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 ATP8B3O60423 1300 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 ABLIM1O14639 778 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 RASSF9O75901 435 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 C22orf31O95567 290 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 GPD1P21695 349 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 OSBPP22059 807 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 SDC4P31431 198 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 NCALDP61601 193 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 DPYSL3Q14195 570 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 TSHZ1Q6ZSZ6 1077 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 MTDHQ86UE4 582 aaKnown RBP13.93□□□□□ -0.18
MCF2L-213ENST00000421756 NT5C1AQ9BXI3 368 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 FZD8Q9H461 694 aa13.93□□□□□ -0.18
MCF2L-213ENST00000421756 FBXO6Q9NRD1 293 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms