RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 IL37Q9NZH6 218 aa21.54■■□□□ 1.04
GTF3A-202ENST00000419181 RWDD2AQ9UIY3 292 aa21.54■■□□□ 1.04
GTF3A-202ENST00000419181 PIEZO1Q92508 2521 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 FAM170BA6NMN3 283 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 MAN2B1O00754 1011 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 BEST1O76090 585 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 YWHAQP27348 245 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 ADORA2BP29275 332 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 SLC5A3P53794 718 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 IFRD2Q12894 506 aaPredicted RBP21.53■■□□□ 1.04
GTF3A-202ENST00000419181 TRIM59Q8IWR1 403 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 ARL14EPQ8N8R7 260 aaPredicted RBP21.53■■□□□ 1.04
GTF3A-202ENST00000419181 SCAMP5Q8TAC9 235 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 CYFIP2Q96F07 1278 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 NELL2Q99435 816 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 PHOX2BQ99453 314 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 FAM83CQ9BQN1 747 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 SRRTQ9BXP5 876 aaKnown RBP21.53■■□□□ 1.04
GTF3A-202ENST00000419181 DNAI2Q9GZS0 605 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 GTSE1Q9NYZ3 720 aa21.53■■□□□ 1.04
GTF3A-202ENST00000419181 MRPS17Q9Y2R5 130 aaKnown RBP21.53■■□□□ 1.04
GTF3A-202ENST00000419181 FAM92AA1XBS5 289 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 OLFM2O95897 454 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 FAM200BP0CF97 657 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 HDCP19113 662 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 PDE6CP51160 858 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 USP4Q13107 963 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 CUL2Q13617 745 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 ZNF394Q53GI3 561 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 CLEC20AQ6ZU45 233 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 ZNF687Q8N1G0 1237 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 OVCA2Q8WZ82 227 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 MSANTD3Q96H12 275 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 IPO9Q96P70 1041 aaKnown RBP21.52■■□□□ 1.04
GTF3A-202ENST00000419181 MED15Q96RN5 788 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 COMMD8Q9NX08 183 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 ARHGAP26Q9UNA1 814 aa21.52■■□□□ 1.04
GTF3A-202ENST00000419181 P4HA2O15460 535 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 OAS1P00973 400 aaKnown RBP21.51■■□□□ 1.03
GTF3A-202ENST00000419181 RAD23BP54727 409 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 MAP3K7CLP57077 242 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 TNK2Q07912 1038 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 FZD5Q13467 585 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 ZNF77Q15935 545 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 MLKLQ8NB16 471 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 SLC4A11Q8NBS3 891 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 PDZD8Q8NEN9 1154 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 FBXO32Q969P5 355 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 CLDN23Q96B33 292 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 GBP4Q96PP9 640 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 NUP62CLQ9H1M0 184 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 C8orf33Q9H7E9 229 aaPredicted RBP21.51■■□□□ 1.03
GTF3A-202ENST00000419181 GKN1Q9NS71 199 aa21.51■■□□□ 1.03
GTF3A-202ENST00000419181 MYO16Q9Y6X6 1858 aa21.5■■□□□ 1.03
GTF3A-202ENST00000419181 CACNA1IQ9P0X4 2223 aa21.5■■□□□ 1.03
GTF3A-202ENST00000419181 FGFR1OPO95684 399 aaKnown RBP21.5■■□□□ 1.03
GTF3A-202ENST00000419181 TCF3P15923 654 aa21.5■■□□□ 1.03
GTF3A-202ENST00000419181 SOX9P48436 509 aa21.5■■□□□ 1.03
GTF3A-202ENST00000419181 KPNA1P52294 538 aaPredicted RBP21.5■■□□□ 1.03
GTF3A-202ENST00000419181 MTF1Q14872 753 aa21.5■■□□□ 1.03
GTF3A-202ENST00000419181 PPP1R26Q5T8A7 1209 aaPredicted RBP21.5■■□□□ 1.03
GTF3A-202ENST00000419181 C1orf228Q6PIY5 440 aa21.5■■□□□ 1.03
GTF3A-202ENST00000419181 LMO3Q8TAP4 145 aa21.5■■□□□ 1.03
GTF3A-202ENST00000419181 FAM3CQ92520 227 aa21.5■■□□□ 1.03
GTF3A-202ENST00000419181 TMEM176AQ96HP8 235 aa21.5■■□□□ 1.03
GTF3A-202ENST00000419181 RNF38Q9H0F5 515 aa21.5■■□□□ 1.03
GTF3A-202ENST00000419181 PNPLA8Q9NP80 782 aa21.5■■□□□ 1.03
GTF3A-202ENST00000419181 HPS4Q9NQG7 708 aa21.5■■□□□ 1.03
GTF3A-202ENST00000419181 HHLA1C9JL84 531 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 SPECC1L-ADORA2AF8WAN1 911 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 NCAM2O15394 837 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 CCDC192P0DO97 292 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 TBXAS1P24557 533 aaPredicted RBP21.49■■□□□ 1.03
GTF3A-202ENST00000419181 CTHP32929 405 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 MAGEA9P43362 315 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 RPS9P46781 194 aaKnown RBP21.49■■□□□ 1.03
GTF3A-202ENST00000419181 SLC7A9P82251 487 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 ZXDBP98169 803 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 KCNH2Q12809 1159 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 LRMPQ12912 555 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 ANGPT1Q15389 498 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 ITPRIPL2Q3MIP1 535 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 SNX30Q5VWJ9 437 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 CC2D1AQ6P1N0 951 aaPredicted RBP21.49■■□□□ 1.03
GTF3A-202ENST00000419181 RALGPS2Q86X27 583 aaPredicted RBP21.49■■□□□ 1.03
GTF3A-202ENST00000419181 UBR7Q8N806 425 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 TTC8Q8TAM2 541 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 SH3RF2Q8TEC5 729 aa21.49■■□□□ 1.03
GTF3A-202ENST00000419181 HEXIM2Q96MH2 286 aaKnown RBP21.49■■□□□ 1.03
GTF3A-202ENST00000419181 NDRG2Q9UN36 371 aaKnown RBP21.49■■□□□ 1.03
GTF3A-202ENST00000419181 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.49■■□□□ 1.03
GTF3A-202ENST00000419181 ABL1P00519 1130 aa21.48■■□□□ 1.03
GTF3A-202ENST00000419181 ZDHHC11BP0C7U3 371 aa21.48■■□□□ 1.03
GTF3A-202ENST00000419181 YWHAEP62258 255 aaKnown RBP21.48■■□□□ 1.03
GTF3A-202ENST00000419181 CETN1Q12798 172 aa21.48■■□□□ 1.03
GTF3A-202ENST00000419181 ARHGAP17Q68EM7 881 aa21.48■■□□□ 1.03
GTF3A-202ENST00000419181 TRIM68Q6AZZ1 485 aa21.48■■□□□ 1.03
GTF3A-202ENST00000419181 TXNDC11Q6PKC3 985 aa21.48■■□□□ 1.03
GTF3A-202ENST00000419181 GPRIN1Q7Z2K8 1008 aa21.48■■□□□ 1.03
GTF3A-202ENST00000419181 NT5C1BQ96P26 610 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms