RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 HOXD10P28358 340 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 TKTP29401 623 aaKnown RBP9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 LPIN1Q14693 890 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 PDK2Q15119 407 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 LLGL1Q15334 1064 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 CCDC142Q17RM4 750 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 TUBB8Q3ZCM7 444 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 CCDC14Q49A88 953 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 CEP85LQ5SZL2 805 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 ZNF618Q5T7W0 954 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 HIBCHQ6NVY1 386 aaPredicted RBP9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 CEP128Q6ZU80 1094 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 FUKQ8N0W3 1084 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 SLC43A3Q8NBI5 491 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 PXYLP1Q8TE99 480 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 UBLCP1Q8WVY7 318 aaPredicted RBP9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 KCTD13Q8WZ19 329 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 TLCD1Q96CP7 247 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 FAF2Q96CS3 445 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 ZFP42Q96MM3 310 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 TSEN34Q9BSV6 310 aaKnown RBP9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 DDX23Q9BUQ8 820 aaKnown RBP9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 TSPYL2Q9H2G4 693 aaPredicted RBP9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 ZWILCHQ9H900 591 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 PADI3Q9ULW8 664 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 ATP8A1Q9Y2Q0 1164 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 PLXNA3P51805 1871 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 MYO16Q9Y6X6 1858 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 VWA8A3KMH1 1905 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 A0A0U1RQF3 1178 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 ARL5CA6NH57 179 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 MOXD2PA6NHM9 499 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 GOLGA6L10A6NI86 522 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 SRRM3A6NNA2 597 aaPredicted RBP9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 MEIS3P2A8K0S8 358 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 CYB561D2O14569 222 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 DNALI1O14645 258 aaPredicted RBP9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 RIPK2O43353 540 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 HCRTO43612 131 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 MGEA5O60502 916 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 AOC2O75106 756 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 DAB1O75553 588 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 TOMM70O94826 608 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 SKIP12755 728 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 ELNP15502 786 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 SDC4P31431 198 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 MLH1P40692 756 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 LHX1P48742 406 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 RGS7P49802 495 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 ITGA8P53708 1063 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 OTUD4Q01804 1114 aaKnown RBP9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 PLCB3Q01970 1234 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 GRIK3Q13003 919 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 CBLBQ13191 982 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 DPYSL3Q14195 570 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 PTGISQ16647 500 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 BOLA3Q53S33 107 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 TNFAIP8L3Q5GJ75 292 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 FAM47CQ5HY64 1035 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 DENND2CQ68D51 928 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 FAM43BQ6ZT52 329 aaPredicted RBP9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 PAQR9Q6ZVX9 377 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 ZNF365Q70YC5 407 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 BNIPLQ7Z465 357 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 RNF180Q86T96 592 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 ZNF598Q86UK7 904 aaKnown RBP9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 HOOK3Q86VS8 718 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 ACSF2Q96CM8 615 aaPredicted RBP9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 PGM2Q96G03 612 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 SENP8Q96LD8 212 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 CCDC114Q96M63 670 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 GAD1Q99259 594 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 DUSP16Q9BY84 665 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 UBN1Q9NPG3 1134 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 RNF19AQ9NV58 838 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 SHOC2Q9UQ13 582 aa9.48□□□□□ -0.89
LINCMD1-201ENST00000418518 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 SMAPO00193 183 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 PRPSAP2O60256 369 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 CST8O60676 142 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 TCEA3O75764 348 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 CYP11A1P05108 521 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 ABHD2P08910 425 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 CD48P09326 243 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 NPR3P17342 541 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 DESP17661 470 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 PTPN1P18031 435 aaKnown RBP9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 NR1D1P20393 614 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 CD52P31358 61 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 CHKAP35790 457 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 THPOP40225 353 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 ACLYP53396 1101 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 HDAC4P56524 1084 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 ADCY1Q08828 1119 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 ITGA7Q13683 1181 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 TFDP2Q14188 446 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 MORF4L2Q15014 288 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 NOMO1Q15155 1222 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 DPYSL2Q16555 572 aa9.47□□□□□ -0.89
LINCMD1-201ENST00000418518 UPP1Q16831 310 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms