RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 BFSP1Q12934 665 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 COL9A2Q14055 689 aaPredicted RBP13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 KARSQ15046 597 aaKnown RBP13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 CCDC142Q17RM4 750 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 HSP90AA4PQ58FG1 418 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 SYT13Q7L8C5 426 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 MON1AQ86VX9 555 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 EFCAB13Q8IY85 973 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 TSPAN18Q96SJ8 248 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 NAA15Q9BXJ9 866 aaKnown RBP13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 TPSD1Q9BZJ3 242 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 BLZF1Q9H2G9 400 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 ECT2Q9H8V3 914 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 DPP3Q9NY33 737 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 KCNG1Q9UIX4 513 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 WNT6Q9Y6F9 365 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 FAM208BQ5VWN6 2430 aa13.58□□□□□ -0.24
CHRNA1-205ENST00000409542 THADAQ6YHU6 1953 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 LRRC10BA6NIK2 292 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 AKR1B15C9JRZ8 316 aaPredicted RBP13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 CDX4O14627 284 aaPredicted RBP13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 RHOBTB1O94844 696 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 SLU7O95391 586 aaKnown RBP13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 BCKDHBP21953 392 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 TAF6P49848 677 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 PSMD2Q13200 908 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 MTF1Q14872 753 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 KYAT1Q16773 422 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 DDR2Q16832 855 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 SH3PXD2AQ5TCZ1 1133 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 CRELD2Q6UXH1 353 aaPredicted RBP13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 GPBP1Q86WP2 473 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 METTL23Q86XA0 190 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 CD302Q8IX05 232 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 THEM5Q8N1Q8 247 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 PDCL2Q8N4E4 241 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 MYCT1Q8N699 235 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 TTC16Q8NEE8 873 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 C2orf15Q8WU43 125 aaKnown RBP13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 CD101Q93033 1021 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 LINC00597Q9H2U6 94 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 BLOC1S4Q9NUP1 217 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 KBTBD4Q9NVX7 518 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 KCND2Q9NZV8 630 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 EBF1Q9UH73 591 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 DSEQ9UL01 958 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 DERAQ9Y315 318 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 IGF2RP11717 2491 aa13.57□□□□□ -0.24
CHRNA1-205ENST00000409542 H0YCG3 227 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 APBB3O95704 486 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 FECHP22830 423 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 PAX3P23760 479 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 CYP2F1P24903 491 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 DDX6P26196 483 aaKnown RBP eCLIP13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 DGKEP52429 567 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 ZNF131P52739 623 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 ZNF268Q14587 947 aaPredicted RBP13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 PDGFRLQ15198 375 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 ELF2Q15723 593 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 ZNF77Q15935 545 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 ZC2HC1CQ53FD0 456 aaPredicted RBP13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 PMS2CLQ68D20 193 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 CC2D1AQ6P1N0 951 aaPredicted RBP13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 TRIM65Q6PJ69 517 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 SYT10Q6XYQ8 523 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 SMYD4Q8IYR2 804 aaPredicted RBP13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 KDF1Q8NAX2 398 aaPredicted RBP13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 ZSWIM2Q8NEG5 633 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 ANKRD20A12PQ8NF67 263 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 NELFBQ8WX92 580 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 MRPS31Q92665 395 aaKnown RBP13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 FAM84AQ96KN4 292 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 KIF9Q9HAQ2 790 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 DUS2Q9NX74 493 aaKnown RBP13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 PPP2R2CQ9Y2T4 447 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 PCDHB5Q9Y5E4 795 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 ANAPC1Q9H1A4 1944 aa13.56□□□□□ -0.24
CHRNA1-205ENST00000409542 KPNA7A9QM74 516 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 TEX33O43247 280 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 HCRTO43612 131 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 RHOBTB3O94955 611 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 CSH1P0DML2 217 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 CSH2P0DML3 217 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 HNRNPLP14866 589 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 ACAT1P24752 427 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 GBP1P32455 592 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 IRX4P78413 519 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 GTF2BQ00403 316 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 GOLGA8FQ08AF8 430 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 GOLGA8DPQ0D2H9 430 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 TRIM14Q14142 442 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 MCM6Q14566 821 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 KRT31Q15323 416 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 EML3Q32P44 896 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 FBXO43Q4G163 708 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 DCP1BQ8IZD4 617 aaKnown RBP13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 OSCP1Q8WVF1 389 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 CDK5RAP3Q96JB5 506 aa13.55□□□□□ -0.24
CHRNA1-205ENST00000409542 ASB7Q9H672 318 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms