RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PCDHB4Q9Y5E5 795 aa18.98■□□□□ 0.63
PDLIM2-206ENST00000409141 PI15O43692 258 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 AOC1P19801 751 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 PDE6CP51160 858 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 ZNF268Q14587 947 aaPredicted RBP18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 HSP90AA4PQ58FG1 418 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 TPRG1Q6ZUI0 275 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 ARHGEF19Q8IW93 802 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 UBR7Q8N806 425 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 TMEM105Q8N8V8 129 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 TTC16Q8NEE8 873 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 CSGALNACT1Q8TDX6 532 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 OVCA2Q8WZ82 227 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 KAT5Q92993 513 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 ZFYVE19Q96K21 471 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 CRACR2AQ9BSW2 395 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 GREB1Q4ZG55 1949 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 CD19P15391 556 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 PFKLP17858 780 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 CD72P21854 359 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 PLCB2Q00722 1185 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 SGO2Q562F6 1265 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 ARHGAP17Q68EM7 881 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 TMEM270Q6UE05 265 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 FBXO44Q9H4M3 255 aa18.97■□□□□ 0.63
PDLIM2-206ENST00000409141 DENND4CQ5VZ89 1909 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 KANSL1LA0AUZ9 987 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 HHLA1C9JL84 531 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 ACO1P21399 889 aaKnown RBP18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 GCNT1Q02742 428 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 ZNF318Q5VUA4 2279 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 CC2D1AQ6P1N0 951 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 ZNF852Q6ZMS4 543 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 GBP6Q6ZN66 633 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 NUP210Q8TEM1 1887 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 FOXQ1Q9C009 403 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 RNF38Q9H0F5 515 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 PNPLA8Q9NP80 782 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 UBE2TQ9NPD8 197 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 GKN1Q9NS71 199 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 SAMSN1Q9NSI8 373 aaKnown RBP18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 ANO10Q9NW15 660 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 KIAA1257Q9ULG3 409 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 SIT1Q9Y3P8 196 aa18.96■□□□□ 0.63
PDLIM2-206ENST00000409141 OBSL1O75147 1896 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 FAM92AA1XBS5 289 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 ARNTLO00327 626 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 PAEPP09466 180 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 VDRP11473 427 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 KPNA1P52294 538 aaPredicted RBP18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 SLC8A3P57103 927 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 MAN2A1Q16706 1144 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 GPRIN1Q7Z2K8 1008 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 ANKRD52Q8NB46 1076 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 TTC8Q8TAM2 541 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 ENOX1Q8TC92 643 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 TUBGCP2Q9BSJ2 902 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 DDX23Q9BUQ8 820 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 KCNH6Q9H252 994 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 GMIPQ9P107 970 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 ARHGAP26Q9UNA1 814 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 NFE2L3Q9Y4A8 694 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 PIAS3Q9Y6X2 628 aa18.95■□□□□ 0.62
PDLIM2-206ENST00000409141 MYH10P35580 1976 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 FAM170BA6NMN3 283 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 KCNJ18B7U540 433 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 MAN2B1O00754 1011 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 OAS1P00973 400 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 PRKCSHP14314 528 aaPredicted RBP18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 GLULP15104 373 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 SLC9A1P19634 815 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 KCNJ12Q14500 433 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 UBXN2BQ14CS0 331 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 STX1AQ16623 288 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 EXOC3L4Q17RC7 722 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 GOLGA7BQ2TAP0 167 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 HECTD3Q5T447 861 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 SH3RF2Q8TEC5 729 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 KREMEN1Q96MU8 473 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 NELL2Q99435 816 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 PRRX2Q99811 253 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 NDST4Q9H3R1 872 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 TLR8Q9NR97 1041 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 GTSE1Q9NYZ3 720 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 TMEM63CQ9P1W3 806 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 HESX1Q9UBX0 185 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 TSPAN16Q9UKR8 245 aa18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 MRPS17Q9Y2R5 130 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-206ENST00000409141 ZNF638Q14966 1978 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-206ENST00000409141 GTPBP10A4D1E9 387 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-206ENST00000409141 RNF225M0QZC1 329 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-206ENST00000409141 ZDHHC11BP0C7U3 371 aa18.93■□□□□ 0.62
PDLIM2-206ENST00000409141 KIF11P52732 1056 aa18.93■□□□□ 0.62
PDLIM2-206ENST00000409141 NUBP1P53384 320 aa18.93■□□□□ 0.62
PDLIM2-206ENST00000409141 MFAP3P55082 362 aa18.93■□□□□ 0.62
PDLIM2-206ENST00000409141 TNK2Q07912 1038 aa18.93■□□□□ 0.62
PDLIM2-206ENST00000409141 VWA3BQ502W6 1294 aa18.93■□□□□ 0.62
PDLIM2-206ENST00000409141 SNX30Q5VWJ9 437 aa18.93■□□□□ 0.62
PDLIM2-206ENST00000409141 TRIM65Q6PJ69 517 aa18.93■□□□□ 0.62
PDLIM2-206ENST00000409141 RBBP8NLQ8NC74 664 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms